RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 XPO7Q9UIA9 1087 aaKnown RBP21.47■■□□□ 1.03
PKNOX1-202ENST00000418336 TLR6Q9Y2C9 796 aa21.47■■□□□ 1.03
PKNOX1-202ENST00000418336 A0A1W2PQF6 199 aa21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 APBB3O95704 486 aa21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 GLI1P08151 1106 aa21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 CHRNB2P17787 502 aa21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 POLR2FP61218 127 aaKnown RBP21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 KIAA0907Q7Z7F0 614 aaPredicted RBP21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 ZNF397Q8NF99 534 aaPredicted RBP21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 MDGA1Q8NFP4 955 aa21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 OLIG1Q8TAK6 271 aa21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 SLC20A1Q8WUM9 679 aa21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 GAB3Q8WWW8 586 aa21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 FAM149B1Q96BN6 582 aa21.46■■□□□ 1.03
PKNOX1-202ENST00000418336 MMEP08473 750 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 KRT9P35527 623 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 ENPP2Q13822 863 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 FKBP15Q5T1M5 1219 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 PIK3R6Q5UE93 754 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 NUGGCQ68CJ6 796 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 RFWD3Q6PCD5 774 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 SLC26A9Q7LBE3 791 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 ZNF513Q8N8E2 541 aaPredicted RBP21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 WFDC5Q8TCV5 224 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 RUBCNQ92622 972 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 SERPINB11Q96P15 392 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 GABRG3Q99928 467 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 DAAM1Q9Y4D1 1078 aa21.45■■□□□ 1.02
PKNOX1-202ENST00000418336 AXIN1O15169 862 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 TEX33O43247 280 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 ACSL4O60488 711 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 TSPAN3O60637 253 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 TRUB2O95900 331 aaKnown RBP21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 CYP1A1P04798 512 aaPredicted RBP21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 SOX5P35711 763 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 NOMO3P69849 1222 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 FMO1Q01740 532 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 PREPLQ4J6C6 727 aaPredicted RBP21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 MPPE1Q53F39 396 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 TAF3Q5VWG9 929 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 TRNP1Q6NT89 227 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 DEFB106AQ8N104 65 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 TSTD1Q8NFU3 115 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 GOLGA1Q92805 767 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 PARD6AQ9NPB6 346 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 NLRC4Q9NPP4 1024 aa21.44■■□□□ 1.02
PKNOX1-202ENST00000418336 PLXND1Q9Y4D7 1925 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 SPAG17Q6Q759 2223 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 KCNU1A8MYU2 1149 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 HSF2BPO75031 334 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 DAB1O75553 588 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 GFPT2O94808 682 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 HLA-FP30511 346 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 DGKEP52429 567 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 SLC6A3Q01959 620 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 SIM2Q14190 667 aaPredicted RBP21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 LPAL2Q16609 132 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 ARTNQ5T4W7 220 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 XYLT1Q86Y38 959 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 UNC45BQ8IWX7 931 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.43■■□□□ 1.021e-8■■■■■ 47.8
PKNOX1-202ENST00000418336 TMEM35BQ8NCS4 154 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 NT5C3BQ969T7 300 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 PRMT1Q99873 361 aaKnown RBP21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 SLC2A11Q9BYW1 496 aa21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 IRX2Q9BZI1 471 aaPredicted RBP21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 RTN4Q9NQC3 1192 aaKnown RBP21.43■■□□□ 1.02
PKNOX1-202ENST00000418336 GRAP2O75791 330 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 RPP40O75818 363 aaKnown RBP21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 LSM8O95777 96 aaKnown RBP21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 TFE3P19532 575 aaPredicted RBP21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 ZNF445P59923 1031 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 UBXN1Q04323 297 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 ZC3H12AQ5D1E8 599 aaKnown RBP21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 EFHC1Q5JVL4 640 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 EOGTQ5NDL2 527 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 MPP7Q5T2T1 576 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 LAIR1Q6GTX8 287 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 KIAA1211LQ6NV74 962 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 BNIPLQ7Z465 357 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 KBTBD6Q86V97 674 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 ZNF677Q86XU0 584 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 FAM160A2Q8N612 972 aaPredicted RBP21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 DDI1Q8WTU0 396 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 ZC3H10Q96K80 434 aaKnown RBP21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 PCDHB18PQ96TA0 734 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 TRIM62Q9BVG3 475 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 TPSD1Q9BZJ3 242 aa21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 NUCKS1Q9H1E3 243 aaKnown RBP21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 THAP10Q9P2Z0 257 aaPredicted RBP21.42■■□□□ 1.02
PKNOX1-202ENST00000418336 FAM170AA1A519 330 aa21.41■■□□□ 1.02
PKNOX1-202ENST00000418336 SYCE3A1L190 88 aa21.41■■□□□ 1.02
PKNOX1-202ENST00000418336 WASH3PC4AMC7 463 aa21.41■■□□□ 1.02
PKNOX1-202ENST00000418336 I6L893 689 aaPredicted RBP21.41■■□□□ 1.02
PKNOX1-202ENST00000418336 DCLK1O15075 740 aa21.41■■□□□ 1.02
PKNOX1-202ENST00000418336 CYBBP04839 570 aa21.41■■□□□ 1.02
PKNOX1-202ENST00000418336 NTSR1P30989 418 aa21.41■■□□□ 1.02
PKNOX1-202ENST00000418336 SCNN1AP37088 669 aa21.41■■□□□ 1.02
PKNOX1-202ENST00000418336 ZNF165P49910 485 aa21.41■■□□□ 1.02
PKNOX1-202ENST00000418336 CDR2Q01850 454 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms