RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 TEDDM1Q5T9Z0 273 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 KAZNQ674X7 775 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 HEATR4Q86WZ0 1026 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 SLC44A3Q8N4M1 653 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.76□□□□□ -1.49
RFC4-204ENST00000417876 SH3RF3Q8TEJ3 882 aaPredicted RBP5.76□□□□□ -1.49
RFC4-204ENST00000417876 OVCA2Q8WZ82 227 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 CPT1BQ92523 772 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 RMI1Q9H9A7 625 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 RXFP3Q9NSD7 469 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 SERTAD4Q9NUC0 356 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 NDUFAF4Q9P032 175 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 MGAT4CQ9UBM8 478 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 RAB21Q9UL25 225 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 USP47Q96K76 1375 aa5.76□□□□□ -1.49
RFC4-204ENST00000417876 ABCC5O15440 1437 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 FSD2A1L4K1 749 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 STX16-NPEPL1H3BU86 382 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 J3KRW8 73 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 CES2O00748 559 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 STX16O14662 325 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 HOXC11O43248 304 aaPredicted RBP5.75□□□□□ -1.49
RFC4-204ENST00000417876 FRAT2O75474 233 aaPredicted RBP5.75□□□□□ -1.49
RFC4-204ENST00000417876 LARGE1O95461 756 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 TNFAIP3P21580 790 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 ADRA1DP25100 572 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 CYP2C18P33260 490 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 THBS4P35443 961 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 MPLP40238 635 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 DIO1P49895 249 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 RPL15P61313 204 aaKnown RBP5.75□□□□□ -1.49
RFC4-204ENST00000417876 TBX2Q13207 712 aaPredicted RBP5.75□□□□□ -1.49
RFC4-204ENST00000417876 SLC12A1Q13621 1099 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 DCTN1Q14203 1278 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 DLGAP5Q15398 846 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 LY6G5CQ5SRR4 150 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 ANKRD40Q6AI12 368 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 PTCHD4Q6ZW05 846 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 USP51Q70EK9 711 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 PARS2Q7L3T8 475 aaKnown RBP5.75□□□□□ -1.49
RFC4-204ENST00000417876 VRK3Q8IV63 474 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 NAXEQ8NCW5 288 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 CEP70Q8NHQ1 597 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 LINC00476Q8WZB0 136 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 REXO5Q96IC2 774 aaKnown RBP5.75□□□□□ -1.49
RFC4-204ENST00000417876 HERC2P3Q9BVR0 1158 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 MMRN2Q9H8L6 949 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 WASH6PQ9NQA3 447 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 ARHGEF3Q9NR81 526 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 DUSP22Q9NRW4 184 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 RRP7BPQ9NSQ0 103 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 LIN7CQ9NUP9 197 aaKnown RBP5.75□□□□□ -1.49
RFC4-204ENST00000417876 DNAJC16Q9Y2G8 782 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 REXO2Q9Y3B8 237 aaKnown RBP5.75□□□□□ -1.49
RFC4-204ENST00000417876 EPN1Q9Y6I3 576 aaPredicted RBP5.75□□□□□ -1.49
RFC4-204ENST00000417876 PLEKHH2Q8IVE3 1493 aa5.75□□□□□ -1.49
RFC4-204ENST00000417876 DAPK1P53355 1430 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 ARHGEF12Q9NZN5 1544 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 DNMT1P26358 1616 aaKnown RBP5.74□□□□□ -1.49
RFC4-204ENST00000417876 SUV39H1O43463 412 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 PRAMEF2O60811 474 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 RHOBTB3O94955 611 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 TJP3O95049 919 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 NXPH3O95157 252 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 PDE8BO95263 885 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 ENGP17813 658 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 FPR3P25089 353 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 ADRA1BP35368 520 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 RBM5P52756 815 aaKnown RBP eCLIP5.74□□□□□ -1.49
RFC4-204ENST00000417876 DGKQP52824 942 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 FOXL2P58012 376 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 TLE2Q04725 743 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 CHRNDQ07001 517 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 FOXI1Q12951 378 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 FAM187BQ17R55 369 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 LSM12Q3MHD2 195 aaKnown RBP5.74□□□□□ -1.49
RFC4-204ENST00000417876 ZNF569Q5MCW4 686 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 DGAT2L7PQ6IED9 249 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 RETSATQ6NUM9 610 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 ACSM6Q6P461 480 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 BBS12Q6ZW61 710 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 KRT27Q7Z3Y8 459 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 PEG10Q86TG7 708 aaKnown RBP5.74□□□□□ -1.49
RFC4-204ENST00000417876 P3H2Q8IVL5 708 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 TMEM57Q8N5G2 664 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 SIRT6Q8N6T7 355 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 HTRA1Q92743 480 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 TRMT61AQ96FX7 289 aaKnown RBP5.74□□□□□ -1.49
RFC4-204ENST00000417876 VPS50Q96JG6 964 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 EIF3CQ99613 913 aaKnown RBP5.74□□□□□ -1.49
RFC4-204ENST00000417876 THAP7Q9BT49 309 aaPredicted RBP5.74□□□□□ -1.49
RFC4-204ENST00000417876 PLEKHA2Q9HB19 425 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 FBXO28Q9NVF7 368 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 CCNL1Q9UK58 526 aaPredicted RBP5.74□□□□□ -1.49
RFC4-204ENST00000417876 TRPC5Q9UL62 973 aaPredicted RBP5.74□□□□□ -1.49
RFC4-204ENST00000417876 NFU1Q9UMS0 254 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 VPS4AQ9UN37 437 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 DERAQ9Y315 318 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 PCDHA10Q9Y5I2 948 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms