RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ATP5DP30049 168 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 LMAN1P49257 510 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 ALDH7A1P49419 539 aaKnown RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 BASP1P80723 227 aaKnown RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 HEATR6Q6AI08 1181 aaKnown RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 CTU1Q7Z7A3 348 aaKnown RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 DEFB128Q7Z7B8 93 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 TAC4Q86UU9 113 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 SH2D3CQ8N5H7 860 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 ADAM32Q8TC27 787 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 ARMC5Q96C12 935 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 CEP295NLQ96MC4 621 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 TTPALQ9BTX7 342 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 TMEM39AQ9NV64 488 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 MICAL3Q7RTP6 2002 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 VWA8A3KMH1 1905 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 FNDC1Q4ZHG4 1894 aaPredicted RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 A0A087WUV0 522 aaPredicted RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 ABHD14A-ACY1A0A1B0GW23 586 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 FAM92AA1XBS5 289 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 IRAK2O43187 625 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 SHOX2O60902 331 aaPredicted RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 STK10O94804 968 aaKnown RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 TPI1P60174 286 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 SPATA17Q96L03 361 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 PWWP2AQ96N64 755 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 HAPLN3Q96S86 360 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 MAGEB5Q9BZ81 275 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 TKTL2Q9H0I9 626 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 DNAJC17Q9NVM6 304 aaKnown RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 ARHGEF38Q9NXL2 777 aa17.36■□□□□ 0.37
SSBP3-205ENST00000417664 BCCIPQ9P287 314 aaKnown RBP eCLIP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 NOVA2Q9UNW9 492 aaKnown RBP17.36■□□□□ 0.37
SSBP3-205ENST00000417664 CLTBP09497 229 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 CPB1P15086 417 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 CCR1P32246 355 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 SERPINB6P35237 376 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 GJA8P48165 433 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 GLUD2P49448 558 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 PSEN1P49768 467 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 KCNJ11Q14654 390 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 PPP2R5DQ14738 602 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 PKN2Q16513 984 aaKnown RBP17.35■□□□□ 0.37
SSBP3-205ENST00000417664 TNFAIP8L3Q5GJ75 292 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 MSANTD2Q6P1R3 559 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 RIBC1Q8N443 379 aaPredicted RBP17.35■□□□□ 0.37
SSBP3-205ENST00000417664 RNF34Q969K3 372 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 SERPINB11Q96P15 392 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 CAPS2Q9BXY5 557 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 ETNK2Q9NVF9 386 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 OR12D3Q9UGF7 316 aa17.35■□□□□ 0.37
SSBP3-205ENST00000417664 XPO7Q9UIA9 1087 aaKnown RBP17.35■□□□□ 0.37
SSBP3-205ENST00000417664 TLDC2A0PJX2 215 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 EFCAB14O75071 495 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 EFEMP2O95967 443 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 ERCC2P18074 760 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 PDIA2Q13087 525 aaKnown RBP17.34■□□□□ 0.37
SSBP3-205ENST00000417664 ANKRD22Q5VYY1 191 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 SCD5Q86SK9 330 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 VPS52Q8N1B4 723 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 HTR3CQ8WXA8 447 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 C9orf72Q96LT7 481 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 CNOT10Q9H9A5 744 aaKnown RBP17.34■□□□□ 0.37
SSBP3-205ENST00000417664 RAB6BQ9NRW1 208 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 ATP11BQ9Y2G3 1177 aa17.34■□□□□ 0.37
SSBP3-205ENST00000417664 MTMR11A4FU01 709 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 E7EVH7 732 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 MTSS1O43312 755 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 MFSD11O43934 449 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 CDH16O75309 829 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 SLC2A3P11169 496 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 MX2P20592 715 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 PHBP35232 272 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 FDFT1P37268 417 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 MAGOHP61326 146 aaKnown RBP17.33■□□□□ 0.37
SSBP3-205ENST00000417664 RPL10AP62906 217 aaKnown RBP17.33■□□□□ 0.37
SSBP3-205ENST00000417664 PPP2R2AP63151 447 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 CDK16Q00536 496 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 AUHQ13825 339 aaKnown RBP17.33■□□□□ 0.37
SSBP3-205ENST00000417664 PRKD1Q15139 912 aaPredicted RBP17.33■□□□□ 0.37
SSBP3-205ENST00000417664 USP41Q3LFD5 358 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 DENND5BQ6ZUT9 1274 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 TAOK1Q7L7X3 1001 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 ZBED8Q8IZ13 594 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 ATP11CQ8NB49 1132 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 MCUQ8NE86 351 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 PYROXD1Q8WU10 500 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 TMPRSS4Q9NRS4 437 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 OLA1Q9NTK5 396 aaKnown RBP17.33■□□□□ 0.37
SSBP3-205ENST00000417664 CLIC5Q9NZA1 410 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 FETUBQ9UGM5 382 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 ZMYND8Q9ULU4 1186 aaPredicted RBP17.33■□□□□ 0.37
SSBP3-205ENST00000417664 BACE2Q9Y5Z0 518 aa17.33■□□□□ 0.37
SSBP3-205ENST00000417664 A0A0A0MRY4 1105 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 I6L893 689 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 OPHN1O60890 802 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 TMEM63AO94886 807 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 ATP2A2P16615 1042 aaKnown RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 TPSB2P20231 275 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 YWHAQP27348 245 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms