RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ERLEC1Q96DZ1 483 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 MRGPRX1Q96LB2 322 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 KREMEN1Q96MU8 473 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 IRX2Q9BZI1 471 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 UBE2TQ9NPD8 197 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 TMEM74BQ9NUR3 256 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 RWDD2AQ9UIY3 292 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 PILRBQ9UKJ0 227 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 CYP8B1Q9UNU6 501 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 TNRC6BQ9UPQ9 1833 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 TPRP12270 2363 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 PIK3R2O00459 728 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 CDX4O14627 284 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 MSI1O43347 362 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 TSPAN3O60637 253 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 KRT5P13647 590 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 ITPKAP23677 461 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 HOXD9P28356 352 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 IL12RB1P42701 662 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 ACADSBP45954 432 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 RPL34P49207 117 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 ZNF234Q14588 700 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 DUOXA1Q1HG43 343 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 N4BP2L1Q5TBK1 243 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 NUGGCQ68CJ6 796 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 KIAA1324Q6UXG2 1013 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 ENOSF1Q7L5Y1 443 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 RABEPKQ7Z6M1 372 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 FAM81BQ96LP2 452 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 CIPCQ9C0C6 399 aa18.33■□□□□ 0.52
PDLIM2-208ENST00000416159 SART1O43290 800 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 MED7O43513 233 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 SYNCRIPO60506 623 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 NDUFS2O75306 463 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 CALCAP01258 141 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 GPD2P43304 727 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 ARID5AQ03989 594 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 RING1Q06587 406 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 CAMK4Q16566 473 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 MEA1Q16626 185 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 FUT11Q495W5 492 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 DEFB119Q8N690 84 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 WFIKKN2Q8TEU8 576 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 CLEC4CQ8WTT0 213 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 AZIN2Q96A70 460 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 MIS12Q9H081 205 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 SLC6A17Q9H1V8 727 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 PRDM16Q9HAZ2 1276 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 SLC6A14Q9UN76 642 aa18.32■□□□□ 0.52
PDLIM2-208ENST00000416159 IGLV3-27P01718 113 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 SLC11A2P49281 568 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 TBX4P57082 545 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 MPP7Q5T2T1 576 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 CREBRFQ8IUR6 639 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 SLC41A1Q8IVJ1 513 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 STK32AQ8WU08 396 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 ZNF419Q96HQ0 510 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 CNTNAP3BQ96NU0 1288 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 DDX50Q9BQ39 737 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 CNTNAP3Q9BZ76 1288 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 ITM2CQ9NQX7 267 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 ST7Q9NRC1 585 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 CHMP5Q9NZZ3 219 aa18.31■□□□□ 0.52
PDLIM2-208ENST00000416159 ASCC3Q8N3C0 2202 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 ATXN2Q99700 1313 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 IRAK2O43187 625 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 ACSL4O60488 711 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 CFIP05156 583 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 SERPINF2P08697 491 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 NCAM1P13591 858 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 ENGP17813 658 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 CD6P30203 668 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 HLA-FP30511 346 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 NOVA1P51513 510 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 UAP1L1Q3KQV9 507 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 SYCP2LQ5T4T6 812 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 PIK3R6Q5UE93 754 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 TMEM215Q68D42 235 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 TMPRSS6Q8IU80 811 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 SCUBE3Q8IX30 993 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 ZNF557Q8N988 423 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 ZNF606Q8WXB4 792 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 SORCS1Q8WY21 1168 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 FOXJ1Q92949 421 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 SIPA1Q96FS4 1042 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 SERPINB11Q96P15 392 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 MKRN2Q9H000 416 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 USP36Q9P275 1121 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 PLA2G4CQ9UP65 541 aa18.3■□□□□ 0.52
PDLIM2-208ENST00000416159 CKAP5Q14008 2032 aa18.29■□□□□ 0.52
PDLIM2-208ENST00000416159 LETM1O95202 739 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-208ENST00000416159 FYNP06241 537 aa18.29■□□□□ 0.52
PDLIM2-208ENST00000416159 EPHX1P07099 455 aa18.29■□□□□ 0.52
PDLIM2-208ENST00000416159 PABPC1P11940 636 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-208ENST00000416159 CSRP1P21291 193 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-208ENST00000416159 PMLP29590 882 aa18.29■□□□□ 0.52
PDLIM2-208ENST00000416159 OXTRP30559 389 aa18.29■□□□□ 0.52
PDLIM2-208ENST00000416159 ATXN3P54252 364 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-208ENST00000416159 GFPT1Q06210 699 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms