RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 SMOC2Q9H3U7 446 aa5.12□□□□□ -1.59
PTPRK-209ENST00000415046 MRPS18AQ9NVS2 196 aaKnown RBP5.12□□□□□ -1.59
PTPRK-209ENST00000415046 EHD3Q9NZN3 535 aa5.12□□□□□ -1.59
PTPRK-209ENST00000415046 FLRT1Q9NZU1 646 aa5.12□□□□□ -1.59
PTPRK-209ENST00000415046 KIAA0100Q14667 2235 aaKnown RBP5.12□□□□□ -1.59
PTPRK-209ENST00000415046 CEP290O15078 2479 aa5.12□□□□□ -1.59
PTPRK-209ENST00000415046 RBBP6Q7Z6E9 1792 aaKnown RBP5.11□□□□□ -1.59
PTPRK-209ENST00000415046 LRRC14BA6NHZ5 514 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 SMIM22K7EJ46 135 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 MARCH6O60337 910 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 ZRANB2O95218 330 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPRK-209ENST00000415046 ERBB2P04626 1255 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 SMARCA1P28370 1054 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 PIK3CGP48736 1102 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 ANAPC15P60006 121 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 TFF2Q03403 129 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 KIF22Q14807 665 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 ODF1Q14990 250 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 SHROOM1Q2M3G4 852 aaPredicted RBP5.11□□□□□ -1.59
PTPRK-209ENST00000415046 TMED8Q6PL24 325 aaPredicted RBP5.11□□□□□ -1.59
PTPRK-209ENST00000415046 CWC27Q6UX04 472 aaKnown RBP5.11□□□□□ -1.59
PTPRK-209ENST00000415046 PPP1R32Q7Z5V6 425 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 CERS3Q8IU89 383 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 CAMKK1Q8N5S9 505 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 DNAJC5GQ8N7S2 189 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 SLC44A5Q8NCS7 719 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 C3orf20Q8ND61 904 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 OPTNQ96CV9 577 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 DYNLL2Q96FJ2 89 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 STRBPQ96SI9 672 aaKnown RBP5.11□□□□□ -1.59
PTPRK-209ENST00000415046 ACTRT3Q9BYD9 372 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 AMBRA1Q9C0C7 1298 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 SIK2Q9H0K1 926 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 DNAJC18Q9H819 358 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 PADI4Q9UM07 663 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 POLHQ9Y253 713 aa5.11□□□□□ -1.59
PTPRK-209ENST00000415046 A0A0G2JMZ2 1700 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 MPHOSPH10O00566 681 aaKnown RBP5.1□□□□□ -1.59
PTPRK-209ENST00000415046 ARIH2O95376 493 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 NR2F6P10588 404 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 ZFXP17010 805 aaPredicted RBP5.1□□□□□ -1.59
PTPRK-209ENST00000415046 ITGALP20701 1170 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 TOB1P50616 345 aaPredicted RBP5.1□□□□□ -1.59
PTPRK-209ENST00000415046 CCT8P50990 548 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 PLCD1P51178 756 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 NOGQ13253 232 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 LLGL1Q15334 1064 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 PLAC9Q5JTB6 97 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 RBM20Q5T481 1227 aaKnown RBP5.1□□□□□ -1.59
PTPRK-209ENST00000415046 VPS53Q5VIR6 699 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 SUMO4Q6EEV6 95 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 CCDC171Q6TFL3 1326 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 ZNF589Q86UQ0 364 aaPredicted RBP5.1□□□□□ -1.59
PTPRK-209ENST00000415046 SEMA6DQ8NFY4 1073 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 FAM136AQ96C01 138 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 C1orf43Q9BWL3 253 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 TINAGL1Q9GZM7 467 aaPredicted RBP5.1□□□□□ -1.59
PTPRK-209ENST00000415046 NAPBQ9H115 298 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 DHX36Q9H2U1 1008 aaKnown RBP5.1□□□□□ -1.59
PTPRK-209ENST00000415046 WDCPQ9H6R7 721 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 HELLSQ9NRZ9 838 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 SERTAD4Q9NUC0 356 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 PI4KBQ9UBF8 816 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 SERGEFQ9UGK8 458 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 ZDHHC8Q9ULC8 765 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 AGAP1Q9UPQ3 857 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 COL4A3BPQ9Y5P4 624 aa5.1□□□□□ -1.59
PTPRK-209ENST00000415046 TNKSO95271 1327 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 CCL15-CCL14A0A0B4J2E2 113 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 ALG1L2C9J202 215 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 HIP1O00291 1037 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 SLC16A6O15403 523 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 CTNND1O60716 968 aaKnown RBP5.09□□□□□ -1.59
PTPRK-209ENST00000415046 PRDM1O75626 825 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 KIF20AO95235 890 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 GH2P01242 217 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 EBLN1P0CF75 366 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 HSPA1AP0DMV8 641 aaKnown RBP5.09□□□□□ -1.59
PTPRK-209ENST00000415046 HSPA1BP0DMV9 641 aaKnown RBP5.09□□□□□ -1.59
PTPRK-209ENST00000415046 CHRM3P20309 590 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 CHMLP26374 656 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 CD6P30203 668 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 SHMT1P34896 483 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 HAND2P61296 217 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 PPIL2Q13356 520 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 BMPR2Q13873 1038 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 CCL15Q16663 113 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 PTPN21Q16825 1174 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 MCMDC2Q4G0Z9 681 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 TEDDM1Q5T9Z0 273 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 CTR9Q6PD62 1173 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 ZNF551Q7Z340 670 aaPredicted RBP5.09□□□□□ -1.59
PTPRK-209ENST00000415046 ERO1BQ86YB8 467 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 FOXP4Q8IVH2 680 aaPredicted RBP5.09□□□□□ -1.59
PTPRK-209ENST00000415046 SCYL3Q8IZE3 742 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 MIER2Q8N344 545 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 PRPF38AQ8NAV1 312 aaKnown RBP5.09□□□□□ -1.59
PTPRK-209ENST00000415046 NACAP1Q9BZK3 213 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 IL25Q9H293 177 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 SLAMF7Q9NQ25 335 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms