RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 IL15P40933 162 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 HTR2BP41595 481 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CTSKP43235 329 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF41P51814 821 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 HUNKP57058 714 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 HTRA3P83110 453 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TAP2Q03519 686 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM62Q0P6H9 643 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ASPHQ12797 758 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CBX3Q13185 183 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 KLF1Q13351 362 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TRIM25Q14258 630 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF267Q14586 743 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 KIR3DS1Q14943 382 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ARHGAP19Q14CB8 494 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ACAP2Q15057 778 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 LLGL1Q15334 1064 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 KYNUQ16719 465 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ATAT1Q5SQI0 421 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TMTC4Q5T4D3 741 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 VWA5B1Q5TIE3 1220 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PIK3R6Q5UE93 754 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 SNX30Q5VWJ9 437 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 UNC13DQ70J99 1090 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 C16orf59Q7L2K0 433 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 GLRX5Q86SX6 157 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 MTDHQ86UE4 582 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 NLRX1Q86UT6 975 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 VPS36Q86VN1 386 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 GATAD2AQ86YP4 633 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PSTKQ8IV42 348 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CADM3Q8N126 398 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF321PQ8N8H1 164 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 MRPL43Q8N983 215 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CNNM3Q8NE01 707 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 HUS1BQ8NHY5 278 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PHOSPHO2Q8TCD6 241 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CALML6Q8TD86 181 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 GANCQ8TET4 914 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TSPEARQ8WU66 669 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 DEPDC1BQ8WUY9 529 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 SLC9A6Q92581 669 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 SYN2Q92777 582 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 INPP5DQ92835 1189 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 GTF3C6Q969F1 213 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 SLC22A18Q96BI1 424 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 OPTNQ96CV9 577 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 LRRC39Q96DD0 335 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 SPACA9Q96E40 222 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TMA16Q96EY4 203 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 EDC3Q96F86 508 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PIWIL1Q96J94 861 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 HHIPL1Q96JK4 782 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 FEM1CQ96JP0 617 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 SLC9A7Q96T83 725 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TRIM62Q9BVG3 475 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 FUT8Q9BYC5 575 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF341Q9BYN7 854 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CRNKL1Q9BZJ0 848 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CCSER1Q9C0I3 900 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CARD9Q9H257 536 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM60Q9H2L4 133 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 EPS8L2Q9H6S3 715 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 C17orf75Q9HAS0 396 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 FAM114A2Q9NRY5 505 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 SLC35D1Q9NTN3 355 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 NUDT15Q9NV35 164 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 POLR3BQ9NW08 1133 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 COQ3Q9NZJ6 369 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 KLHL9Q9P2J3 617 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PADI4Q9UM07 663 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PCDHGB4Q9UN71 923 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CLCA2Q9UQC9 943 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF148Q9UQR1 794 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TNFSF13BQ9Y275 285 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 STK38LQ9Y2H1 464 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PCDHB6Q9Y5E3 794 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 RPAP1Q9BWH6 1393 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CCDC171Q6TFL3 1326 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 WDR91A4D1P6 747 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 GOLGA6L9A6NEM1 432 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 NUDT19A8MXV4 375 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 H0YAE9 185 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SCAMP1O15126 338 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TO15178 435 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 EXOC3O60645 756 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TBX10O75333 385 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SPAG6O75602 509 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CBR3O75828 277 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TUSC2O75896 110 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TMCC1O94876 653 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SCGB1D1O95968 90 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CFBP00751 764 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PENKP01210 267 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 OPN1LWP04000 364 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 GJB1P08034 283 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PFKMP08237 780 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PNMA6AP0CW24 399 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 MYBP10242 640 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 RALAP11233 206 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms