RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 RSPO4Q2I0M5 234 aaPredicted RBP27.38■■□□□ 1.97
VEGFA-207ENST00000413642 FAM133BQ5BKY9 247 aaKnown RBP27.38■■□□□ 1.97
VEGFA-207ENST00000413642 SORCS1Q8WY21 1168 aa27.38■■□□□ 1.97
VEGFA-207ENST00000413642 MYEOVQ96EZ4 313 aa27.38■■□□□ 1.97
VEGFA-207ENST00000413642 LHX5Q9H2C1 402 aa27.38■■□□□ 1.97
VEGFA-207ENST00000413642 SMOC1Q9H4F8 434 aa27.38■■□□□ 1.97
VEGFA-207ENST00000413642 CD248Q9HCU0 757 aa27.38■■□□□ 1.97
VEGFA-207ENST00000413642 ANO10Q9NW15 660 aa27.38■■□□□ 1.97
VEGFA-207ENST00000413642 CAPN9O14815 690 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 LATS1O95835 1130 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 MBD3O95983 291 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 ERBB2P04626 1255 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 UCHL3P15374 230 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 KRT9P35527 623 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 YWHAZP63104 245 aaKnown RBP27.37■■□□□ 1.97
VEGFA-207ENST00000413642 RING1Q06587 406 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 CSRP2Q16527 193 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 STX1AQ16623 288 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 CCDC183Q5T5S1 534 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 NUGGCQ68CJ6 796 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 TMEM215Q68D42 235 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 SDE2Q6IQ49 451 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 UNC45BQ8IWX7 931 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 SLC39A13Q96H72 371 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 LOXL4Q96JB6 756 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 SERPINB11Q96P15 392 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 GABRG3Q99928 467 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 SLC6A17Q9H1V8 727 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 TMEM63CQ9P1W3 806 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 XPO7Q9UIA9 1087 aaKnown RBP27.37■■□□□ 1.97
VEGFA-207ENST00000413642 STON1Q9Y6Q2 735 aa27.37■■□□□ 1.97
VEGFA-207ENST00000413642 GRAP2O75791 330 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 SLC11A2P49281 568 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 PIK3R6Q5UE93 754 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 FAM183BPQ6ZVS7 135 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 BEND5Q7L4P6 421 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 ANKS1BQ7Z6G8 1248 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 IPO4Q8TEX9 1081 aaKnown RBP27.36■■□□□ 1.97
VEGFA-207ENST00000413642 SLC2A11Q9BYW1 496 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 GANQ9H2C0 597 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 POPDC2Q9HBU9 364 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 TLR6Q9Y2C9 796 aa27.36■■□□□ 1.97
VEGFA-207ENST00000413642 LRP3O75074 770 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 MOCS2O96007 188 aaPredicted RBP27.35■■□□□ 1.97
VEGFA-207ENST00000413642 CYP11B1P15538 503 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 P2RY2P41231 377 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 LMNB2Q03252 620 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 SF3A2Q15428 464 aaKnown RBP27.35■■□□□ 1.97
VEGFA-207ENST00000413642 ELF2Q15723 593 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 MAP7D1Q3KQU3 841 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 PTPN20Q4JDL3 420 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 ZC3H12AQ5D1E8 599 aaKnown RBP27.35■■□□□ 1.97
VEGFA-207ENST00000413642 TAF3Q5VWG9 929 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 OR6B2Q6IFH4 312 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 PRR23CQ6ZRP0 262 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 DEFB106AQ8N104 65 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 WFDC5Q8TCV5 224 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 PRICKLE1Q96MT3 831 aaPredicted RBP27.35■■□□□ 1.97
VEGFA-207ENST00000413642 CIPCQ9C0C6 399 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 ELOVL2Q9NXB9 296 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 THAP10Q9P2Z0 257 aaPredicted RBP27.35■■□□□ 1.97
VEGFA-207ENST00000413642 MBD1Q9UIS9 605 aaPredicted RBP27.35■■□□□ 1.97
VEGFA-207ENST00000413642 EML5Q05BV3 1969 aa27.35■■□□□ 1.97
VEGFA-207ENST00000413642 EPHB6O15197 1021 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 TBL1XO60907 577 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 RHOBTB1O94844 696 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 TRUB2O95900 331 aaKnown RBP27.34■■□□□ 1.97
VEGFA-207ENST00000413642 HLA-FP30511 346 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 IL12RB1P42701 662 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 DCAF6Q58WW2 860 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 PMS2CLQ68D20 193 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 STK33Q9BYT3 514 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 NUCKS1Q9H1E3 243 aaKnown RBP27.34■■□□□ 1.97
VEGFA-207ENST00000413642 CALCOCO1Q9P1Z2 691 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 STIM2Q9P246 746 aa27.34■■□□□ 1.97
VEGFA-207ENST00000413642 WDR87Q6ZQQ6 2873 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 IRAK2O43187 625 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 GDF9O60383 454 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 IGLV3-25P01717 112 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 NDUFV2P19404 249 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 COPB1P53618 953 aaKnown RBP27.33■■□□□ 1.97
VEGFA-207ENST00000413642 BPIFB4P59827 614 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 ZNF445P59923 1031 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 MYL5Q02045 173 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 NNTQ13423 1086 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 NCAPHQ15003 741 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 SMYD5Q6GMV2 418 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 NOP9Q86U38 636 aaKnown RBP27.33■■□□□ 1.97
VEGFA-207ENST00000413642 AZIN2Q96A70 460 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 SLC2A13Q96QE2 648 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 FAM207AQ9NSI2 230 aaPredicted RBP27.33■■□□□ 1.97
VEGFA-207ENST00000413642 ABCB8Q9NUT2 735 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 DLL3Q9NYJ7 618 aa27.33■■□□□ 1.97
VEGFA-207ENST00000413642 FRYLO94915 3013 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 SYNJ2BP-COX16A0A087WUM0 186 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 F8VZ95 297 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 MPLP40238 635 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 RPS24P62847 133 aaKnown RBP27.32■■□□□ 1.96
VEGFA-207ENST00000413642 CREB5Q02930 508 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 ZNF234Q14588 700 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms