RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CEP83Q9Y592 693 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 PLXND1Q9Y4D7 1925 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 ACSL4O60488 711 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 GRAP2O75791 330 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 RPP40O75818 363 aaKnown RBP15.41■□□□□ 0.06
LIMS4-201ENST00000413601 GFPT2O94808 682 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 HOXD9P28356 352 aaPredicted RBP15.41■□□□□ 0.06
LIMS4-201ENST00000413601 SLC6A4P31645 630 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 WASP42768 502 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 SLC11A2P49281 568 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 SGSHP51688 502 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 JAM2P57087 298 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 PITX1P78337 314 aaPredicted RBP15.41■□□□□ 0.06
LIMS4-201ENST00000413601 KLHL40Q2TBA0 621 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 DCAF6Q58WW2 860 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 EFHC1Q5JVL4 640 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 ANO7Q6IWH7 933 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 DEFB106AQ8N104 65 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 TMEM35BQ8NCS4 154 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 TMA16Q96EY4 203 aaKnown RBP15.41■□□□□ 0.06
LIMS4-201ENST00000413601 SLC39A13Q96H72 371 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 ACOX2Q99424 681 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 BPIFA3Q9BQP9 254 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 TPSD1Q9BZJ3 242 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 SYNCQ9H7C4 482 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 SLC27A6Q9Y2P4 619 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 RIF1Q5UIP0 2472 aaKnown RBP15.41■□□□□ 0.06
LIMS4-201ENST00000413601 NUP205Q92621 2012 aa15.41■□□□□ 0.06
LIMS4-201ENST00000413601 OTOGLQ3ZCN5 2332 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 ABCA7Q8IZY2 2146 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 SMTNL1A8MU46 457 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 GFRA2O00451 464 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 TRUB2O95900 331 aaKnown RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 MOCS2O96007 188 aaPredicted RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 GLI1P08151 1106 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 MMEP08473 750 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 NTSR1P30989 418 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 CDH5P33151 784 aaPredicted RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 SOX5P35711 763 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 ZNF165P49910 485 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 SNX16P57768 344 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 SLC6A3Q01959 620 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 NNTQ13423 1086 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 GEN1Q17RS7 908 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 FAM133BQ5BKY9 247 aaKnown RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 ZC3H12AQ5D1E8 599 aaKnown RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 LAIR1Q6GTX8 287 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 NADSYN1Q6IA69 706 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 OLFML1Q6UWY5 402 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 TRMT11Q7Z4G4 463 aaKnown RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 FAM160A2Q8N612 972 aaPredicted RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 NEK11Q8NG66 645 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 EPS8L1Q8TE68 723 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 IPO4Q8TEX9 1081 aaKnown RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 SLC20A1Q8WUM9 679 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 AZIN2Q96A70 460 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 ERLEC1Q96DZ1 483 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 SPAG5Q96R06 1193 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 ERGIC2Q96RQ1 377 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 FUCA2Q9BTY2 467 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 SLC2A11Q9BYW1 496 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 POLMQ9NP87 494 aaPredicted RBP15.4■□□□□ 0.06
LIMS4-201ENST00000413601 ASNSD1Q9NWL6 643 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 INVSQ9Y283 1065 aa15.4■□□□□ 0.06
LIMS4-201ENST00000413601 SYCE3A1L190 88 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 DCLK1O15075 740 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 IRAK2O43187 625 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 HSF2BPO75031 334 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 IGLV3-25P01717 112 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 ZNF445P59923 1031 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 PIK3R6Q5UE93 754 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 SDE2Q6IQ49 451 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 ANKS1BQ7Z6G8 1248 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 KBTBD6Q86V97 674 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 RASSF3Q86WH2 238 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 KIAA2013Q8IYS2 634 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 CHPFQ8IZ52 775 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 MDGA1Q8NFP4 955 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 HMGB4Q8WW32 186 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 CPA5Q8WXQ8 436 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 SLC2A13Q96QE2 648 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 XPO7Q9UIA9 1087 aaKnown RBP15.39■□□□□ 0.05
LIMS4-201ENST00000413601 NOCTQ9UK39 431 aaKnown RBP15.39■□□□□ 0.05
LIMS4-201ENST00000413601 GMEB2Q9UKD1 530 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 CKAP5Q14008 2032 aa15.39■□□□□ 0.05
LIMS4-201ENST00000413601 PTPRZ1P23471 2315 aaPredicted RBP15.39■□□□□ 0.05
LIMS4-201ENST00000413601 SDK1Q7Z5N4 2213 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 SYNJ2BP-COX16A0A087WUM0 186 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 TCRBV21S2A2A0A5A6 115 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 WASH3PC4AMC7 463 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 TEX33O43247 280 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 TBL1XO60907 577 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 ALDH1A2O94788 518 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 LSM8O95777 96 aaKnown RBP15.38■□□□□ 0.05
LIMS4-201ENST00000413601 APOEP02649 317 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 HOXB2P14652 356 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 STAT1P42224 750 aa15.38■□□□□ 0.05
LIMS4-201ENST00000413601 GABRB2P47870 512 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms