RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 FGFR3P22607 806 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 CYP7A1P22680 504 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 PTPN3P26045 913 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ACVR2AP27037 513 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 RDXP35241 583 aaKnown RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 MSX2P35548 267 aaPredicted RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 CCR10P46092 362 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 BAG6P46379 1132 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC6A9P48067 706 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ARCN1P48444 511 aaKnown RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 TUBB4BP68371 445 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ROM1Q03395 351 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 TEFQ10587 303 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 TRA2AQ13595 282 aaKnown RBP eCLIP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC29A2Q14542 456 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 PROSER3Q2NL68 480 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 NRN1LQ496H8 165 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ANKRD20A4Q4UJ75 823 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SGO2Q562F6 1265 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 CCDC178Q5BJE1 867 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ANKRD20A8PQ5CZ79 823 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 RNFT1Q5M7Z0 435 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 RTP2Q5QGT7 225 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ANKRD20A2Q5SQ80 823 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ANKRD20A1Q5TYW2 823 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ANKRD20A3Q5VUR7 823 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 TMEM270Q6UE05 265 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ZYG11AQ6WRX3 759 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ATG14Q6ZNE5 492 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ILDR2Q71H61 639 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 DSG4Q86SJ6 1040 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 HOOK3Q86VS8 718 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ZNF655Q8N720 491 aaPredicted RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 FAM181AQ8N9Y4 354 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 DAGLBQ8NCG7 672 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 OR52K1Q8NGK4 314 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 RASSF8Q8NHQ8 419 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 PSMA8Q8TAA3 256 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SUN5Q8TC36 379 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 DUSP19Q8WTR2 217 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC13A3Q8WWT9 602 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 WASF1Q92558 559 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SPSB4Q96A44 273 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SAAL1Q96ER3 474 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 RBM17Q96I25 401 aaKnown RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 TCEANC2Q96MN5 208 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 LZTS2Q9BRK4 669 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 MLPHQ9BV36 600 aaPredicted RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 CCDC94Q9BW85 323 aaPredicted RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 PLVAPQ9BX97 442 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 GCOM2Q9BZD3 368 aaPredicted RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SH2D4AQ9H788 454 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SEMA3GQ9NS98 782 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 EXOC1Q9NV70 894 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 POLR3BQ9NW08 1133 aaPredicted RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 KCND2Q9NZV8 630 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 PPIEQ9UNP9 301 aaKnown RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 CNTN6Q9UQ52 1028 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 GDAQ9Y2T3 454 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 TELO2Q9Y4R8 837 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 CLCA3PQ9Y6N3 262 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 KDRP35968 1356 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 WDR7Q9Y4E6 1490 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 TSPOAP1O95153 1857 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 FAM237BA0A1B0GVD1 139 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 SHISA3A0PJX4 238 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 TTC24A2A3L6 582 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 H7C1W4 665 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 L7N2F9 121 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 RAB27BO00194 218 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 CD3EAPO15446 510 aaKnown RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 RGS9O75916 674 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 SEC14L2O76054 403 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 ZNF205O95201 554 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 OR2C1O95371 312 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 STAMBPO95630 424 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 ASGR1P07306 291 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 KRT5P13647 590 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 PDGFRAP16234 1089 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 CASTP20810 708 aaKnown RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 MST1P26927 711 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 TNFRSF8P28908 595 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 AVPR2P30518 371 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 GNL1P36915 607 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 ARL1P40616 181 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 PIK3CGP48736 1102 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 CENPAP49450 140 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 BMXP51813 675 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 EPHA5P54756 1037 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 CDH15P55291 814 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 TBL3Q12788 808 aaKnown RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 TRIM28Q13263 835 aaKnown RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 DNTTIP2Q5QJE6 756 aaKnown RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 CST9LP1Q5W188 147 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 PM20D1Q6GTS8 502 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 CENPPQ6IPU0 288 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 PPP1R21Q6ZMI0 780 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 SPATA31D1Q6ZQQ2 1576 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 ERN2Q76MJ5 926 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms