RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 MSI1O43347 362 aaKnown RBP16.85■□□□□ 0.29
DDR1-230ENST00000412274 RPP40O75818 363 aaKnown RBP16.85■□□□□ 0.29
DDR1-230ENST00000412274 RETP07949 1114 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 SOX5P35711 763 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 GABRB2P47870 512 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 ZNF165P49910 485 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 TPM4P67936 248 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 SLC6A3Q01959 620 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 DMWDQ09019 674 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 USP39Q53GS9 565 aaKnown RBP16.85■□□□□ 0.29
DDR1-230ENST00000412274 ACBD5Q5T8D3 534 aaPredicted RBP16.85■□□□□ 0.29
DDR1-230ENST00000412274 TRIM72Q6ZMU5 477 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 SLC26A9Q7LBE3 791 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 ANKS1BQ7Z6G8 1248 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 RASSF3Q86WH2 238 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 PASD1Q8IV76 773 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 WFIKKN2Q8TEU8 576 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 C18orf8Q96DM3 657 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 SLC39A13Q96H72 371 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 SLC2A13Q96QE2 648 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 HHIPQ96QV1 700 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 FAM207AQ9NSI2 230 aaPredicted RBP16.85■□□□□ 0.29
DDR1-230ENST00000412274 PLK2Q9NYY3 685 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 ZFHX2Q9C0A1 2572 aaPredicted RBP16.85■□□□□ 0.29
DDR1-230ENST00000412274 MYOFQ9NZM1 2061 aa16.85■□□□□ 0.29
DDR1-230ENST00000412274 TRUB2O95900 331 aaKnown RBP16.84■□□□□ 0.29
DDR1-230ENST00000412274 IGLV3-25P01717 112 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 CHRM1P11229 460 aaPredicted RBP16.84■□□□□ 0.29
DDR1-230ENST00000412274 NOS2P35228 1153 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 JAM2P57087 298 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 MESP2Q0VG99 397 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 SYCP1Q15431 976 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 DCAF6Q58WW2 860 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 OR6B2Q6IFH4 312 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 PRR23BQ6ZRT6 265 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 ERICH1Q86X53 443 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 CCDC117Q8IWD4 279 aaPredicted RBP16.84■□□□□ 0.29
DDR1-230ENST00000412274 CCDC33Q8N5R6 958 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 ATP6V0D2Q8N8Y2 350 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 EPS8L1Q8TE68 723 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 DDX1Q92499 740 aaKnown RBP16.84■□□□□ 0.29
DDR1-230ENST00000412274 PIWIL1Q96J94 861 aaKnown RBP16.84■□□□□ 0.29
DDR1-230ENST00000412274 ZC3H10Q96K80 434 aaKnown RBP16.84■□□□□ 0.29
DDR1-230ENST00000412274 BTN2A3PQ96KV6 586 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 FCRL2Q96LA5 508 aaPredicted RBP16.84■□□□□ 0.29
DDR1-230ENST00000412274 PAXBP1Q9Y5B6 917 aa16.84■□□□□ 0.29
DDR1-230ENST00000412274 SGK1O00141 431 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 RHOBTB1O94844 696 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 PNMA6AP0CW24 399 aaPredicted RBP16.83■□□□□ 0.28
DDR1-230ENST00000412274 CCR1P32246 355 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 CDR2Q01850 454 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 EIF4EBP2Q13542 120 aaPredicted RBP16.83■□□□□ 0.28
DDR1-230ENST00000412274 PTPN20Q4JDL3 420 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 EMC10Q5UCC4 262 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 PIK3R6Q5UE93 754 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 SYPL2Q5VXT5 272 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 OLFML1Q6UWY5 402 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 ARCQ7LC44 396 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.83■□□□□ 0.28
DDR1-230ENST00000412274 TAC4Q86UU9 113 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 CHPFQ8IZ52 775 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 HJURPQ8NCD3 748 aaPredicted RBP16.83■□□□□ 0.28
DDR1-230ENST00000412274 BHMTQ93088 406 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 GABRG3Q99928 467 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 HSD3B7Q9H2F3 369 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 MYO6Q9UM54 1294 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 VPS13AQ96RL7 3174 aa16.83■□□□□ 0.28
DDR1-230ENST00000412274 PRRT4C9JH25 899 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 DAB1O75553 588 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 F9P00740 461 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 HOXB2P14652 356 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 ABCB4P21439 1286 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 SDHBP21912 280 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 HOXD9P28356 352 aaPredicted RBP16.82■□□□□ 0.28
DDR1-230ENST00000412274 MATKP42679 507 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 ARID5AQ03989 594 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 ELF2Q15723 593 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 RNF43Q68DV7 783 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 FAM183BPQ6ZVS7 135 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 APTXQ7Z2E3 356 aaKnown RBP16.82■□□□□ 0.28
DDR1-230ENST00000412274 NOP9Q86U38 636 aaKnown RBP16.82■□□□□ 0.28
DDR1-230ENST00000412274 DHX40Q8IX18 779 aaKnown RBP16.82■□□□□ 0.28
DDR1-230ENST00000412274 DEFB106AQ8N104 65 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDR1-230ENST00000412274 FUCA2Q9BTY2 467 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 FAM204AQ9H8W3 233 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 NLRC4Q9NPP4 1024 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 ELOVL2Q9NXB9 296 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 TJP2Q9UDY2 1190 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 STAP1Q9ULZ2 295 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 PCDHGA5Q9Y5G8 931 aa16.82■□□□□ 0.28
DDR1-230ENST00000412274 KCNU1A8MYU2 1149 aa16.81■□□□□ 0.28
DDR1-230ENST00000412274 TRIM24O15164 1050 aa16.81■□□□□ 0.28
DDR1-230ENST00000412274 TSPAN3O60637 253 aa16.81■□□□□ 0.28
DDR1-230ENST00000412274 ADAM23O75077 832 aa16.81■□□□□ 0.28
DDR1-230ENST00000412274 GFPT2O94808 682 aa16.81■□□□□ 0.28
DDR1-230ENST00000412274 ERBB2P04626 1255 aa16.81■□□□□ 0.28
DDR1-230ENST00000412274 PXNP49023 591 aaPredicted RBP16.81■□□□□ 0.28
DDR1-230ENST00000412274 STARD3Q14849 445 aa16.81■□□□□ 0.28
DDR1-230ENST00000412274 FAM133BQ5BKY9 247 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms