RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ADRA1BP35368 520 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 THBS4P35443 961 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 GRIA3P42263 894 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 DIO1P49895 249 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 MRPS35P82673 323 aaKnown RBP5.76□□□□□ -1.49
LSM5-206ENST00000409987 MPP3Q13368 585 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 SMAD1Q15797 465 aaKnown RBP5.76□□□□□ -1.49
LSM5-206ENST00000409987 AAK1Q2M2I8 961 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 DGAT2L7PQ6IED9 249 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 C16orf89Q6UX73 402 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 C4orf50Q6ZRC1 276 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 SYT13Q7L8C5 426 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 WDR53Q7Z5U6 358 aaPredicted RBP5.76□□□□□ -1.49
LSM5-206ENST00000409987 ANKS1BQ7Z6G8 1248 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 TMTC1Q8IUR5 882 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 OR8H2Q8N162 312 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 REXO5Q96IC2 774 aaKnown RBP5.76□□□□□ -1.49
LSM5-206ENST00000409987 COQ10AQ96MF6 247 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 FSD1LQ9BXM9 530 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 RSPH9Q9H1X1 276 aaPredicted RBP5.76□□□□□ -1.49
LSM5-206ENST00000409987 CHODLQ9H9P2 273 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 LIN7CQ9NUP9 197 aaKnown RBP5.76□□□□□ -1.49
LSM5-206ENST00000409987 MGAT4CQ9UBM8 478 aa5.76□□□□□ -1.49
LSM5-206ENST00000409987 UBE2J1Q9Y385 318 aaPredicted RBP5.76□□□□□ -1.49
LSM5-206ENST00000409987 TMPRSS11DO60235 418 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 EBLN1P0CF75 366 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 PEPDP12955 493 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 MAKP20794 623 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 FPR3P25089 353 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 FAM187BQ17R55 369 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 WDR45BQ5MNZ6 344 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 PNPLA1Q8N8W4 532 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 BEND2Q8NDZ0 799 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 CEP70Q8NHQ1 597 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 ACTRT2Q8TDY3 377 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 THAP7Q9BT49 309 aaPredicted RBP5.75□□□□□ -1.49
LSM5-206ENST00000409987 ZNF747Q9BV97 191 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 ZNF341Q9BYN7 854 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 IFT80Q9P2H3 777 aaPredicted RBP5.75□□□□□ -1.49
LSM5-206ENST00000409987 ADAMTS5Q9UNA0 930 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 TTLL3Q9Y4R7 772 aa5.75□□□□□ -1.49
LSM5-206ENST00000409987 A0A1W2PRQ8 180 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 NPIPB8E9PQR5 432 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 ANP32CO43423 234 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 SUV39H1O43463 412 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 PRAMEF2O60811 474 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 HEXIM1O94992 359 aaKnown RBP5.74□□□□□ -1.49
LSM5-206ENST00000409987 PDE8BO95263 885 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 TTLL1O95922 423 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 MBPP02686 304 aaPredicted RBP5.74□□□□□ -1.49
LSM5-206ENST00000409987 TFRCP02786 760 aaKnown RBP5.74□□□□□ -1.49
LSM5-206ENST00000409987 TMIGD3P0DMS9 266 aaPredicted RBP5.74□□□□□ -1.49
LSM5-206ENST00000409987 MMP8P22894 467 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 KRT9P35527 623 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 AVPR1BP47901 424 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 CCR5P51681 352 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 TERF1P54274 439 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 RPL15P61313 204 aaKnown RBP5.74□□□□□ -1.49
LSM5-206ENST00000409987 TAP1Q03518 808 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 LMAN2Q12907 356 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 PDCLQ13371 301 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 SLC12A1Q13621 1099 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 ALDH1L2Q3SY69 923 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 ZNF569Q5MCW4 686 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 SPATA1Q5VX52 437 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 ANKRD40Q6AI12 368 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 ACSM6Q6P461 480 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 ANKRD16Q6P6B7 361 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 BRINP3Q76B58 766 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 TMEM57Q8N5G2 664 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 PCYOX1LQ8NBM8 494 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 ABHD11Q8NFV4 315 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 CAVIN3Q969G5 261 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 MAELQ96JY0 434 aaKnown RBP5.74□□□□□ -1.49
LSM5-206ENST00000409987 TWNKQ96RR1 684 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 CYP4F11Q9HBI6 524 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 UBN1Q9NPG3 1134 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 WASH6PQ9NQA3 447 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 FOXJ2Q9P0K8 574 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 LRIT1Q9P2V4 623 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 RAB21Q9UL25 225 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 TRPC5Q9UL62 973 aaPredicted RBP5.74□□□□□ -1.49
LSM5-206ENST00000409987 ST3GAL5Q9UNP4 418 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 DERAQ9Y315 318 aa5.74□□□□□ -1.49
LSM5-206ENST00000409987 CCDC151A5D8V7 595 aa5.73□□□□□ -1.49
LSM5-206ENST00000409987 B4E171 279 aa5.73□□□□□ -1.49
LSM5-206ENST00000409987 QSOX1O00391 747 aa5.73□□□□□ -1.49
LSM5-206ENST00000409987 NKX2-8O15522 239 aa5.73□□□□□ -1.49
LSM5-206ENST00000409987 ZNF202O95125 648 aa5.73□□□□□ -1.49
LSM5-206ENST00000409987 NPSP0C0P6 89 aa5.73□□□□□ -1.49
LSM5-206ENST00000409987 MYCLP12524 364 aaPredicted RBP5.73□□□□□ -1.49
LSM5-206ENST00000409987 ZNF37AP17032 561 aaPredicted RBP5.73□□□□□ -1.49
LSM5-206ENST00000409987 NDUFB7P17568 137 aa5.73□□□□□ -1.49
LSM5-206ENST00000409987 IGHMBP2P38935 993 aaKnown RBP5.73□□□□□ -1.49
LSM5-206ENST00000409987 TSPAN7P41732 249 aa5.73□□□□□ -1.49
LSM5-206ENST00000409987 RBM5P52756 815 aaKnown RBP eCLIP5.73□□□□□ -1.49
LSM5-206ENST00000409987 EEFSECP57772 596 aaKnown RBP5.73□□□□□ -1.49
LSM5-206ENST00000409987 KRTAP10-2P60368 255 aa5.73□□□□□ -1.49
LSM5-206ENST00000409987 RBM6P78332 1123 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms