RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 ZNF366Q8N895 744 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 RBBP8NLQ8NC74 664 aaPredicted RBP11.1□□□□□ -0.63
CCDC148-203ENST00000409889 RAD54LQ92698 747 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 RNF25Q96BH1 459 aaPredicted RBP11.1□□□□□ -0.63
CCDC148-203ENST00000409889 SMARCD1Q96GM5 515 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 ACCSQ96QU6 501 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 CBWD1Q9BRT8 395 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 STRA6Q9BX79 667 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 PCIF1Q9H4Z3 704 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 MRPL44Q9H9J2 332 aaKnown RBP11.1□□□□□ -0.63
CCDC148-203ENST00000409889 CYLDQ9NQC7 956 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 GDF3Q9NR23 364 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 KRT82Q9NSB4 513 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 COMMD8Q9NX08 183 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 ANKMY1Q9P2S6 941 aa11.1□□□□□ -0.63
CCDC148-203ENST00000409889 SPENQ96T58 3664 aaKnown RBP11.1□□□□□ -0.63
CCDC148-203ENST00000409889 NYNRINQ9P2P1 1898 aaKnown RBP11.09□□□□□ -0.63
CCDC148-203ENST00000409889 A0A1W2PPC4 97 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 FAM47DPA6NHR8 397 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 K7ENP7 123 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 SLC26A4O43511 780 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 AP1G2O75843 785 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 DXOO77932 396 aaKnown RBP11.09□□□□□ -0.63
CCDC148-203ENST00000409889 ACP1P24666 158 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 CD38P28907 300 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 UBA7P41226 1012 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 ZBTB16Q05516 673 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 GRIN1Q05586 938 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 BNIP3Q12983 259 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 DUOXA2Q1HG44 320 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 WDR72Q3MJ13 1102 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 INO80CQ6PI98 192 aaPredicted RBP11.09□□□□□ -0.63
CCDC148-203ENST00000409889 ZNF574Q6ZN55 896 aaPredicted RBP11.09□□□□□ -0.63
CCDC148-203ENST00000409889 GPD1LQ8N335 351 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 FAM184AQ8NB25 1140 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 RASSF8Q8NHQ8 419 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 LARP4BQ92615 738 aaKnown RBP11.09□□□□□ -0.63
CCDC148-203ENST00000409889 AK8Q96MA6 479 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 FBXO44Q9H4M3 255 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 AASDHPPTQ9NRN7 309 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 OSER1Q9NX31 292 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 TBC1D7Q9P0N9 293 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 NUDT5Q9UKK9 219 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 CLEC4EQ9ULY5 219 aa11.09□□□□□ -0.63
CCDC148-203ENST00000409889 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
CCDC148-203ENST00000409889 CYP26A1O43174 497 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 USP12O75317 370 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 STC2O76061 302 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 GCNT3O95395 438 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 CHKAP35790 457 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 PLA2G4AP47712 749 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 RPS14P62263 151 aaKnown RBP11.08□□□□□ -0.64
CCDC148-203ENST00000409889 HMGN5P82970 282 aaKnown RBP11.08□□□□□ -0.64
CCDC148-203ENST00000409889 NFKB2Q00653 900 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 E2F1Q01094 437 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 FNDC3BQ53EP0 1204 aaKnown RBP11.08□□□□□ -0.64
CCDC148-203ENST00000409889 ARL6IP4Q66PJ3 421 aaKnown RBP11.08□□□□□ -0.64
CCDC148-203ENST00000409889 PAQR9Q6ZVX9 377 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 DYMQ7RTS9 669 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 TRAPPC11Q7Z392 1133 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 WDR49Q8IV35 697 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 SYCP3Q8IZU3 236 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 ZMIZ2Q8NF64 920 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 VCPIP1Q96JH7 1222 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 LLPHQ9BRT6 129 aaKnown RBP11.08□□□□□ -0.64
CCDC148-203ENST00000409889 TMEM245Q9H330 911 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 FBRSQ9HAH7 460 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 EBF2Q9HAK2 575 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 ASCL3Q9NQ33 180 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 THSD1Q9NS62 852 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 NOTCH2Q04721 2471 aa11.08□□□□□ -0.64
CCDC148-203ENST00000409889 USP9YO00507 2555 aaPredicted RBP11.07□□□□□ -0.64
CCDC148-203ENST00000409889 A0A1W2PR77 199 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 WNT9AO14904 365 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 BEST1O76090 585 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 CST3P01034 146 aaPredicted RBP11.07□□□□□ -0.64
CCDC148-203ENST00000409889 KLKB1P03952 638 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 CYBBP04839 570 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 FAM163BP0C2L3 166 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 GP1BBP13224 206 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 RARGP13631 454 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 LSSP48449 732 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 CASP5P51878 434 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 NEK4P51957 841 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 SURF1Q15526 300 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 PROX2Q3B8N5 592 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 RILPL1Q5EBL4 403 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 C10orf120Q5SQS8 335 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 KLHDC10Q6PID8 442 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 NCEH1Q6PIU2 408 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 ATG14Q6ZNE5 492 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 KANSL1Q7Z3B3 1105 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 FUKQ8N0W3 1084 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 OXR1Q8N573 874 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 EXD3Q8N9H8 876 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 CYB5D2Q8WUJ1 264 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 DEPDC7Q96QD5 511 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 SMOQ99835 787 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 POLR1BQ9H9Y6 1135 aa11.07□□□□□ -0.64
CCDC148-203ENST00000409889 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms