RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 DDX20Q9UHI6 824 aaKnown RBP7.78□□□□□ -1.16
CXCR4-202ENST00000409817 GGA2Q9UJY4 613 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 SF3B1O75533 1304 aaKnown RBP eCLIP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 C9IYK1 514 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 E7ESA3 106 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 PIK3R2O00459 728 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 EBAG9O00559 213 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 NDUFAB1O14561 156 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CHADO15335 359 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CAPN5O15484 640 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 FAM107AO95990 144 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CYP11A1P05108 521 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 LCP1P13796 627 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 IL4RP24394 825 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 TKTP29401 623 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CCND3P30281 292 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 RPL22P35268 128 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ARL4AP40617 200 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CLCNKBP51801 687 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 TUSC3Q13454 348 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ITGA7Q13683 1181 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ARHGEF6Q15052 776 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 TAF5Q15542 800 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ZNF618Q5T7W0 954 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CYP4F22Q6NT55 531 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 DARS2Q6PI48 645 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CLEC20AQ6ZU45 233 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 BNIPLQ7Z465 357 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CDKL3Q8IVW4 592 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CNPY4Q8N129 248 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 PDIK1LQ8N165 341 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SCML4Q8N228 414 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 GLIS1Q8NBF1 620 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 MYCBPAPQ8TBZ2 947 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 EPS8L3Q8TE67 593 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CPT1BQ92523 772 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 WNT8BQ93098 351 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 HSH2DQ96JZ2 352 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 GLT1D1Q96MS3 346 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SLC2A13Q96QE2 648 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ZIC5Q96T25 663 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ACBD6Q9BR61 282 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 MED10Q9BTT4 135 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CCDC134Q9H6E4 229 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 NRDE2Q9H7Z3 1164 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 AGO3Q9H9G7 860 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 POPDC2Q9HBU9 364 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 PNPLA8Q9NP80 782 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 POLMQ9NP87 494 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SAYSD1Q9NPB0 183 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ZDHHC3Q9NYG2 299 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SENP1Q9P0U3 644 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SLC24A2Q9UI40 661 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 PRDM4Q9UKN5 801 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 AP4E1Q9UPM8 1137 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ATXN2Q99700 1313 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 GMNCA6NCL1 334 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 A6NHS1 94 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 HACD1B0YJ81 288 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 H7C0C1 242 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 M0QZQ0 153 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 TRAPPC3O43617 180 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SPAG6O75602 509 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 EOMESO95936 686 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ZSCAN5DPP0CG00 497 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ATP2A2P16615 1042 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CYP2F1P24903 491 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CD52P31358 61 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 L1CAMP32004 1257 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 MAGEA6P43360 314 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ATP5OP48047 213 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SCNN1GP51170 649 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ACLYP53396 1101 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 RNASELQ05823 741 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ADCY1Q08828 1119 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ADIGQ0VDE8 80 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 LPIN1Q14693 890 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 KCTD19Q17RG1 926 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 TRIM71Q2Q1W2 868 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 MDH1BQ5I0G3 518 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 RAB41Q5JT25 222 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 PAQR9Q6ZVX9 377 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 MICALCLQ6ZW33 695 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 UNC45BQ8IWX7 931 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 PQLC3Q8N755 202 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ATP11CQ8NB49 1132 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 PCDH19Q8TAB3 1148 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 IRGQQ8WZA9 623 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 ARHGEF2Q92974 986 aaKnown RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 NTAN1Q96AB6 310 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 FAM149B1Q96BN6 582 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 PGAP3Q96FM1 320 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SMARCD1Q96GM5 515 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SUSD3Q96L08 255 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 NPY6RQ99463 290 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 FERMT1Q9BQL6 677 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 CSNK1G1Q9HCP0 422 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 KRT82Q9NSB4 513 aa7.77□□□□□ -1.17
CXCR4-202ENST00000409817 SAE1Q9UBE0 346 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-202ENST00000409817 THSD7BQ9C0I4 1608 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms