RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 XYLBO75191 536 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 BRAFP15056 766 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 GARSP41250 739 aaKnown RBP11.75□□□□□ -0.53
SNX13-202ENST00000409604 GBE1Q04446 702 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 C1orf220Q5T0J3 134 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 RARS2Q5T160 578 aaKnown RBP11.75□□□□□ -0.53
SNX13-202ENST00000409604 RASSF3Q86WH2 238 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 XYLT1Q86Y38 959 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 CREG2Q8IUH2 290 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 ANKS4BQ8N8V4 417 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 LRRC8CQ8TDW0 803 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 RPL10LQ96L21 214 aaKnown RBP11.75□□□□□ -0.53
SNX13-202ENST00000409604 FICDQ9BVA6 458 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 CAPS2Q9BXY5 557 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 SHCBP1LQ9BZQ2 653 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 ZDHHC4Q9NPG8 344 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 CFAP97Q9P2B7 532 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 GGT7Q9UJ14 662 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 PTGESO14684 152 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 ADAMTS4O75173 837 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 BEST1O76090 585 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 EOMESO95936 686 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 FAM153BP0C7A2 387 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 LAG3P18627 525 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 ZNF143P52747 638 aaPredicted RBP11.75□□□□□ -0.53
SNX13-202ENST00000409604 CENPCQ03188 943 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 DHX34Q14147 1143 aaKnown RBP11.75□□□□□ -0.53
SNX13-202ENST00000409604 FAM153CQ494X1 144 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 CCDC185Q8N715 623 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 SNX19Q92543 992 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 FBXL18Q96ME1 805 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 SYNDIG1Q9H7V2 258 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 IRAK4Q9NWZ3 460 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 FAM153AQ9UHL3 310 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 PCDHA3Q9Y5H8 950 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 DDX60LQ5H9U9 1706 aaKnown RBP11.75□□□□□ -0.53
SNX13-202ENST00000409604 TBL1XO60907 577 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 LRCH4O75427 683 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 MAGEA4P43358 317 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 PITX1P78337 314 aaPredicted RBP11.75□□□□□ -0.53
SNX13-202ENST00000409604 RPS6KA2Q15349 733 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 RABGAP1LQ5R372 815 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 MARC1Q5VT66 337 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 ZNF366Q8N895 744 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 TRAIPQ9BWF2 469 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 MAGEB5Q9BZ81 275 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNX13-202ENST00000409604 FAM187AA6NFU0 413 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 RNF103O00237 685 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 PAGE1O75459 146 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 PPM1AP35813 382 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 GPM6BQ13491 265 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 PAPD7Q5XG87 772 aaKnown RBP11.75□□□□□ -0.53
SNX13-202ENST00000409604 RD3Q7Z3Z2 195 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 KLHL23Q8NBE8 558 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 KREMEN2Q8NCW0 462 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 LPCAT1Q8NF37 534 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNX13-202ENST00000409604 BBS2Q9BXC9 721 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 SEMA4AQ9H3S1 761 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 A0A1B0GUL6 1792 aa11.75□□□□□ -0.53
SNX13-202ENST00000409604 IGKV6-21A0A0C4DH24 114 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 TRIM66O15016 1216 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 RFPL2O75678 378 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 SYF2O95926 243 aaKnown RBP11.74□□□□□ -0.53
SNX13-202ENST00000409604 SSTR1P30872 391 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 MATKP42679 507 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 ERFP50548 548 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 RCN2Q14257 317 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 FASTKD1Q53R41 847 aaKnown RBP11.74□□□□□ -0.53
SNX13-202ENST00000409604 ANKRD20A3Q5VUR7 823 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 NUGGCQ68CJ6 796 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 CCDC121Q6ZUS5 278 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 PTAR1Q7Z6K3 402 aaPredicted RBP11.74□□□□□ -0.53
SNX13-202ENST00000409604 DQX1Q8TE96 717 aaKnown RBP11.74□□□□□ -0.53
SNX13-202ENST00000409604 POF1BQ8WVV4 589 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 VPS39Q96JC1 886 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 UROC1Q96N76 676 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 CLDND1Q9NY35 253 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 DCTN4Q9UJW0 460 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 TMEM191CA6NGB0 347 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 NEDD8-MDP1E9PL57 170 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 COPEO14579 308 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 PFDN6O15212 129 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 FGF18O76093 207 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 GALTP07902 379 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 CSH1P0DML2 217 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 CSH2P0DML3 217 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 NR1D1P20393 614 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 CASP2P42575 452 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 BMPR2Q13873 1038 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 CA9Q16790 459 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 FYB2Q5VWT5 728 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 PTPRN2Q92932 1015 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 ISCUQ9H1K1 167 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 ERVK-5Q9HDB9 667 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 LATS2Q9NRM7 1088 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 MARCOQ9UEW3 520 aaPredicted RBP11.74□□□□□ -0.53
SNX13-202ENST00000409604 MYH9P35579 1960 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms