RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MTIF2P46199 727 aaKnown RBP15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 BPIFB4P59827 614 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 CREB5Q02930 508 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 PTK2Q05397 1052 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 MTA1Q13330 715 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 ENPP2Q13822 863 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 MAN2A1Q16706 1144 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 MAP7D1Q3KQU3 841 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 IL31Q6EBC2 164 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 RABEPKQ7Z6M1 372 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 IRF2BP1Q8IU81 584 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 SCUBE3Q8IX30 993 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 IPO4Q8TEX9 1081 aaKnown RBP15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 SERPINB11Q96P15 392 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 SLC4A5Q9BY07 1137 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 NUP62CLQ9H1M0 184 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 LHX5Q9H2C1 402 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 ELOVL2Q9NXB9 296 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 PLK2Q9NYY3 685 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 SFMBT1Q9UHJ3 866 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 HCN2Q9UL51 889 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 TLR6Q9Y2C9 796 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 SPAG17Q6Q759 2223 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 KHNYNO15037 678 aaKnown RBP15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 TRIM24O15164 1050 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 LETM1O95202 739 aaPredicted RBP15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 IGLV3-27P01718 113 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 GLI1P08151 1106 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 NCAM1P13591 858 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 GABRG2P18507 467 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 PON1P27169 355 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 GNA15P30679 374 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 RGS7P49802 495 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 YWHAZP63104 245 aaKnown RBP15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 EGFLAMQ63HQ2 1017 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 TOGARAM2Q6ZUX3 1019 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 CEP76Q8TAP6 659 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 WFIKKN2Q8TEU8 576 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 SHC3Q92529 594 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 NDRG1Q92597 394 aaKnown RBP15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 NOX5Q96PH1 765 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 ST7Q9NRC1 585 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 PLA2G4CQ9UP65 541 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 RALGAPA1Q6GYQ0 2036 aa15.14■□□□□ 0.01
NIF3L1-205ENST00000409588 TYW5A2RUC4 315 aaKnown RBP15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 ANTXRLA6NF34 631 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 CAPN9O14815 690 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 THAP12O43422 761 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 SYNCRIPO60506 623 aaKnown RBP15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 SLC9A1P19634 815 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 TBX4P57082 545 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 ARID5AQ03989 594 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 ARSIQ5FYB1 569 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 CYP2U1Q7Z449 544 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 SYT12Q8IV01 421 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 CCDC117Q8IWD4 279 aaPredicted RBP15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 BHMTQ93088 406 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 CRACR2AQ9BSW2 395 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 MIS12Q9H081 205 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 NDST4Q9H3R1 872 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 POPDC2Q9HBU9 364 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 CD248Q9HCU0 757 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 EVLQ9UI08 416 aaPredicted RBP15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 PCDHGC3Q9UN70 934 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 STON1Q9Y6Q2 735 aa15.13■□□□□ 0.01
NIF3L1-205ENST00000409588 ACSL4O60488 711 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 ATP5BP06576 529 aaKnown RBP15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 SLC2A3P11169 496 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 EEF1GP26641 437 aaKnown RBP15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 OXTRP30559 389 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 DHPSP49366 369 aaPredicted RBP15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 LMAN2Q12907 356 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 EFHC1Q5JVL4 640 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 PIK3R6Q5UE93 754 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 RNF43Q68DV7 783 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 KIAA0907Q7Z7F0 614 aaPredicted RBP15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 FAM149B1Q96BN6 582 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 GBP4Q96PP9 640 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 ACOX2Q99424 681 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 TUBGCP2Q9BSJ2 902 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 FBRSQ9HAH7 460 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 ASNSD1Q9NWL6 643 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 SLC12A6Q9UHW9 1150 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 INVSQ9Y283 1065 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 DNAH14Q0VDD8 3507 aa15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 MYO18AQ92614 2054 aaKnown RBP15.12■□□□□ 0.01
NIF3L1-205ENST00000409588 EML5Q05BV3 1969 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 GOLGA6L22H0YM25 854 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 TM4SF5O14894 197 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 GDF9O60383 454 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 FYNP06241 537 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 HOXD9P28356 352 aaPredicted RBP15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 KRT9P35527 623 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 USP8P40818 1118 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 SF3A2Q15428 464 aaKnown RBP15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 ARHGAP44Q17R89 818 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 GEN1Q17RS7 908 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 STPG1Q5TH74 334 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms