RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 CYP4F11Q9HBI6 524 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 TLR8Q9NR97 1041 aaKnown RBP14.56□□□□□ -0.08
GPNMB-203ENST00000409458 CLIC5Q9NZA1 410 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 WHRNQ9P202 907 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 HSFX1Q9UBD0 423 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 HPCAL4Q9UM19 191 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 MAGED2Q9UNF1 606 aaPredicted RBP14.56□□□□□ -0.08
GPNMB-203ENST00000409458 LAMA2P24043 3122 aaKnown RBP14.56□□□□□ -0.08
GPNMB-203ENST00000409458 TLL1O43897 1013 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 MFSD11O43934 449 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 ZDHHC11BP0C7U3 371 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 CTSAP10619 480 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 ADCY8P40145 1251 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 TPI1P60174 286 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 SLC10A2Q12908 348 aaPredicted RBP14.55□□□□□ -0.08
GPNMB-203ENST00000409458 BRMS1LQ5PSV4 323 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 UNC45BQ8IWX7 931 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 PHOSPHO2Q8TCD6 241 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 CEP295NLQ96MC4 621 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 PCDH9Q9HC56 1237 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.55□□□□□ -0.08
GPNMB-203ENST00000409458 H7C0C1 242 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 DCLK1O15075 740 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 TEX28O15482 410 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 TBX18O95935 607 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 IFNB1P01574 187 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 CA8P35219 290 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 ATP5OP48047 213 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 PSEN1P49768 467 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 ITGA8P53708 1063 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 EFEMP1Q12805 493 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 CALCOCO2Q13137 446 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 DARS2Q6PI48 645 aaKnown RBP14.55□□□□□ -0.08
GPNMB-203ENST00000409458 MREGQ8N565 214 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 CCDC33Q8N5R6 958 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 FAM71DQ8N9W8 422 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 CCHCR1Q8TD31 782 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 LRRN4Q8WUT4 740 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 RSAD2Q8WXG1 361 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 ZBTB9Q96C00 473 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 HTATIP2Q9BUP3 242 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 RXFP1Q9HBX9 757 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.55□□□□□ -0.08
GPNMB-203ENST00000409458 DTLQ9NZJ0 730 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 FNIP2Q9P278 1114 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 STK39Q9UEW8 545 aa14.55□□□□□ -0.08
GPNMB-203ENST00000409458 HMGA1P17096 107 aaKnown RBP14.54□□□□□ -0.08
GPNMB-203ENST00000409458 CCR1P32246 355 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 CTNNB1P35222 781 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 HSPA9P38646 679 aaKnown RBP14.54□□□□□ -0.08
GPNMB-203ENST00000409458 NRLP54845 237 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 PPP2R5DQ14738 602 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 P3H1Q32P28 736 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 IZUMO3Q5VZ72 239 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 RHBDF2Q6PJF5 856 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 TMC3Q7Z5M5 1100 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 GPR65Q8IYL9 337 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 SLC39A13Q96H72 371 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 FCRL2Q96LA5 508 aaPredicted RBP14.54□□□□□ -0.08
GPNMB-203ENST00000409458 OLFM3Q96PB7 478 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 EPAS1Q99814 870 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 CCSER2Q9H7U1 834 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 OLA1Q9NTK5 396 aaKnown RBP14.54□□□□□ -0.08
GPNMB-203ENST00000409458 OR12D3Q9UGF7 316 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 XPO7Q9UIA9 1087 aaKnown RBP14.54□□□□□ -0.08
GPNMB-203ENST00000409458 NEU3Q9UQ49 428 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 TLR6Q9Y2C9 796 aa14.54□□□□□ -0.08
GPNMB-203ENST00000409458 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.53□□□□□ -0.08
GPNMB-203ENST00000409458 KCNU1A8MYU2 1149 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 PAGE1O75459 146 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 LRIG2O94898 1065 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 CNPP09543 421 aaKnown RBP14.53□□□□□ -0.08
GPNMB-203ENST00000409458 ERCC2P18074 760 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 ITIH2P19823 946 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 NR2C2P49116 596 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 TBX4P57082 545 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 CREMQ03060 361 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 TWF1Q12792 350 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 GPS1Q13098 491 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 C10orf120Q5SQS8 335 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 NETO2Q8NC67 525 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 QKIQ96PU8 341 aaKnown RBP eCLIP14.53□□□□□ -0.08
GPNMB-203ENST00000409458 HAPLN3Q96S86 360 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 TXLNGYQ9BZA5 131 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 FAM129AQ9BZQ8 928 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 UBE2OQ9C0C9 1292 aaKnown RBP14.53□□□□□ -0.08
GPNMB-203ENST00000409458 OSBPL2Q9H1P3 480 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 VIPAS39Q9H9C1 493 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 PRDM16Q9HAZ2 1276 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 FAM53CQ9NYF3 392 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 MTRF1LQ9UGC7 380 aaKnown RBP14.53□□□□□ -0.08
GPNMB-203ENST00000409458 INSL5Q9Y5Q6 135 aa14.53□□□□□ -0.08
GPNMB-203ENST00000409458 BCLAF3A2AJT9 711 aaKnown RBP14.52□□□□□ -0.08
GPNMB-203ENST00000409458 LINC01553A4QN01 128 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 DNALI1O14645 258 aaPredicted RBP14.52□□□□□ -0.08
GPNMB-203ENST00000409458 PRRG1O14668 218 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 CSPG5O95196 566 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 MOCS2O96007 188 aaPredicted RBP14.52□□□□□ -0.08
GPNMB-203ENST00000409458 CSH1P0DML2 217 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 CSH2P0DML3 217 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms