RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PPM1JQ5JR12 505 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 IL31Q6EBC2 164 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 GBP6Q6ZN66 633 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 GOLGA1Q92805 767 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 MRGPRX1Q96LB2 322 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 SLC2A11Q9BYW1 496 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 TMEM74BQ9NUR3 256 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 ELOVL2Q9NXB9 296 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 NAALADL1Q9UQQ1 740 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 CKAP5Q14008 2032 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 GOLGA6L7A0A1B0GV03 622 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 THAP12O43422 761 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 PON1P27169 355 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 GNA15P30679 374 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 USP8P40818 1118 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 MTIF2P46199 727 aaKnown RBP20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 RPL6Q02878 288 aaKnown RBP20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 EXOC3L4Q17RC7 722 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 RNF43Q68DV7 783 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 RFWD3Q6PCD5 774 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 ENOSF1Q7L5Y1 443 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 TMA16Q96EY4 203 aaKnown RBP20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 EDEM2Q9BV94 578 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 SLC4A5Q9BY07 1137 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 CIPCQ9C0C6 399 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 APEX2Q9UBZ4 518 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 CYP8B1Q9UNU6 501 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 TPRP12270 2363 aaKnown RBP20.08■□□□□ 0.81
SMARCB1-204ENST00000407422 IGHV1OR15-9A0A0B4J2B8 117 aa20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 ZBTB24O43167 697 aaPredicted RBP20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 LATS1O95835 1130 aa20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 HLA-FP30511 346 aa20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 TBX4P57082 545 aa20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 ENPP2Q13822 863 aa20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 TPD52L1Q16890 204 aaPredicted RBP20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 FUT11Q495W5 492 aa20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 ADAM32Q8TC27 787 aa20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 DQX1Q8TE96 717 aaKnown RBP20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 AJAP1Q9UKB5 411 aaPredicted RBP20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 ATXN2Q99700 1313 aaKnown RBP20.08■□□□□ 0.8
SMARCB1-204ENST00000407422 E5RJQ4 531 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 KHNYNO15037 678 aaKnown RBP20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 PAPSS1O43252 624 aaPredicted RBP20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 MED7O43513 233 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 KCNA4P22459 653 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 ITPKAP23677 461 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 SLC6A4P31645 630 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 IRX4P78413 519 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 ZNF234Q14588 700 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 HSP90AA4PQ58FG1 418 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 FAM133BQ5BKY9 247 aaKnown RBP20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 SYPL2Q5VXT5 272 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 UCMAQ8WVF2 138 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 FAM149B1Q96BN6 582 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 MKRN2Q9H000 416 aaKnown RBP20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 SIX2Q9NPC8 291 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 TJP2Q9UDY2 1190 aa20.07■□□□□ 0.8
SMARCB1-204ENST00000407422 ADAMTS9Q9P2N4 1935 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 GTPBP10A4D1E9 387 aaKnown RBP20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 PRKCHP24723 683 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 ACADSBP45954 432 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 ZNF445P59923 1031 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 RING1Q06587 406 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 EIF4HQ15056 248 aaKnown RBP20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 MEA1Q16626 185 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 SPDYCQ5MJ68 293 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 PIK3R6Q5UE93 754 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 LYSMD4Q5XG99 296 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 NUGGCQ68CJ6 796 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 NADSYN1Q6IA69 706 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 KIAA1324Q6UXG2 1013 aaKnown RBP20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 TMEM110Q86TL2 294 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 UNC45BQ8IWX7 931 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 WFDC5Q8TCV5 224 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 STK32AQ8WU08 396 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 SHC3Q92529 594 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 FCRL2Q96LA5 508 aaPredicted RBP20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 NUP62CLQ9H1M0 184 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 THAP9Q9H5L6 903 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 ABCB8Q9NUT2 735 aa20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 ASCC3Q8N3C0 2202 aaKnown RBP20.06■□□□□ 0.8
SMARCB1-204ENST00000407422 C4orf47A7E2U8 309 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 NPC1O15118 1278 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 AP5Z1O43299 807 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 ACSL4O60488 711 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 ZNF217O75362 1048 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 SLC11A2P49281 568 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 STARD3Q14849 445 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 SLC36A4Q6YBV0 504 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 SYT12Q8IV01 421 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 WDTC1Q8N5D0 677 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 MYEOVQ96EZ4 313 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 FAM81BQ96LP2 452 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 PILRBQ9UKJ0 227 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 CHD8Q9HCK8 2581 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 MUC22E2RYF6 1773 aaPredicted RBP20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 SART1O43290 800 aaKnown RBP20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 TBL1XO60907 577 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 PDCLQ13371 301 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 TAF5Q15542 800 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms