RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ACOX2Q99424 681 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 ECDO95905 644 aaPredicted RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 RALGDSQ12967 914 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 NFE2Q16621 373 aaPredicted RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 PDPK2PQ6A1A2 396 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 SLC47A2Q86VL8 602 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 GANQ9H2C0 597 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 USP32Q8NFA0 1604 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 A0A088AWK7 358 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 BIRC5O15392 142 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 KCNQ2O43526 872 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 KRT6AP02538 564 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 KRT6BP04259 564 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 ZNF10P21506 573 aaPredicted RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 GRK2P25098 689 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 KRT6CP48668 564 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 TRIM32Q13049 653 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 POU6F1Q14863 301 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 TCEAL5Q5H9L2 206 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 ARMC4Q5T2S8 1044 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 GJB7Q6PEY0 223 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 CACTIN-AS1Q8N1I8 211 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 FAM120BQ96EK7 910 aaKnown RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 HIC2Q96JB3 615 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 USP42Q9H9J4 1324 aaKnown RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 NCKAP1Q9Y2A7 1128 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 CLPTM1O96005 669 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 FASP25445 335 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 PRAMEF18Q5VWM3 479 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 ZNF280DQ6N043 979 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 KCNB2Q92953 911 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 SCNN1BP51168 640 aa12.33□□□□□ -0.43
SMCR8-201ENST00000406438 AGKQ53H12 422 aa12.33□□□□□ -0.43
SMCR8-201ENST00000406438 STARD8Q92502 1023 aa12.33□□□□□ -0.43
SMCR8-201ENST00000406438 TMEM176AQ96HP8 235 aa12.33□□□□□ -0.43
SMCR8-201ENST00000406438 TMEM121Q9BTD3 319 aa12.33□□□□□ -0.43
SMCR8-201ENST00000406438 A0A0A6YYK5 440 aaPredicted RBP12.33□□□□□ -0.44
SMCR8-201ENST00000406438 SERPINF2P08697 491 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 SLC1A6P48664 564 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 IL5RAQ01344 420 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 OVGP1Q12889 678 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 STOX1Q6ZVD7 989 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 FAM228AQ86W67 206 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 FNDC5Q8NAU1 212 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 HASPINQ8TF76 798 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 EPB41L4BQ9H329 900 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 SLC40A1Q9NP59 571 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 VAV3Q9UKW4 847 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 ZNF232Q9UNY5 417 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 SLC12A8A0AV02 714 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 MTA2O94776 668 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 RTN3O95197 1032 aaPredicted RBP12.33□□□□□ -0.44
SMCR8-201ENST00000406438 KLRC2P26717 231 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 ORC1Q13415 861 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 PRR5LQ6MZQ0 368 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 IKBIPQ70UQ0 350 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 GLT6D1Q7Z4J2 308 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 AHI1Q8N157 1196 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 SVOPQ8N4V2 548 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
SMCR8-201ENST00000406438 H3BN98 237 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 KATNA1O75449 491 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 CRABP2P29373 138 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 GRTP1Q5TC63 336 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 PTAR1Q7Z6K3 402 aaPredicted RBP12.33□□□□□ -0.44
SMCR8-201ENST00000406438 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 DPF2Q92785 391 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 KLHL1Q9NR64 748 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 ATG7O95352 703 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 HIST1H2ABP04908 130 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 ZNF286BP0CG31 522 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 VAV1P15498 845 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 CYP2F1P24903 491 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 KLRC1P26715 233 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 RAP1GAPP47736 663 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 SETMARQ53H47 684 aaPredicted RBP12.33□□□□□ -0.44
SMCR8-201ENST00000406438 HIST3H2AQ7L7L0 130 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 PEG10Q86TG7 708 aaKnown RBP12.33□□□□□ -0.44
SMCR8-201ENST00000406438 HIST1H2ACQ93077 130 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 FICDQ9BVA6 458 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 NOD2Q9HC29 1040 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 VTI1BQ9UEU0 232 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 SGPL1O95470 568 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 GPR15P49685 360 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 IRAK1P51617 712 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 PLEKHH3Q7Z736 793 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 WDR49Q8IV35 697 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 TC2NQ8N9U0 490 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 CYP3A43Q9HB55 503 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 NEXMIFQ5QGS0 1516 aa12.33□□□□□ -0.44
SMCR8-201ENST00000406438 CASTOR2A6NHX0 329 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 VPS4BO75351 444 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 SLC2A4P14672 509 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 AQP5P55064 265 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CCZ1BP86790 482 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms