RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 MDGA1Q8NFP4 955 aa18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 IPO4Q8TEX9 1081 aaKnown RBP18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 SLC20A1Q8WUM9 679 aa18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 GAB3Q8WWW8 586 aa18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 DDX1Q92499 740 aaKnown RBP18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 TRIM62Q9BVG3 475 aa18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 FAM204AQ9H8W3 233 aa18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 XPO7Q9UIA9 1087 aaKnown RBP18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 STOML2Q9UJZ1 356 aa18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 FBXO10Q9UK96 956 aa18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 TLR6Q9Y2C9 796 aa18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 FAM186AA6NE01 2351 aa18.9■□□□□ 0.62
PTPRN2-204ENST00000404321 TCRBV21S2A2A0A5A6 115 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 ACSL4O60488 711 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 TRUB2O95900 331 aaKnown RBP18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 MMEP08473 750 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 HOXD9P28356 352 aaPredicted RBP18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 RING1Q06587 406 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 KLHL40Q2TBA0 621 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 MPPE1Q53F39 396 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 C2CD6Q53TS8 623 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 FAM133BQ5BKY9 247 aaKnown RBP18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 ZC3H12AQ5D1E8 599 aaKnown RBP18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 NADSYN1Q6IA69 706 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 OLFML1Q6UWY5 402 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 NEK11Q8NG66 645 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 EPS8L1Q8TE68 723 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 TMA16Q96EY4 203 aaKnown RBP18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 MYEOVQ96EZ4 313 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 SPAG5Q96R06 1193 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 CACNA2D2Q9NY47 1150 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 GMEB2Q9UKD1 530 aa18.89■□□□□ 0.61
PTPRN2-204ENST00000404321 FANCMQ8IYD8 2048 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 OTOGLQ3ZCN5 2332 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 CCDC163A0A0D9SF12 145 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 LRRC10BA6NIK2 292 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 HSF2BPO75031 334 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 LATS1O95835 1130 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 SOX5P35711 763 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 ZNF165P49910 485 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 JAM2P57087 298 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 HSF5Q4G112 596 aaPredicted RBP18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 EFHC1Q5JVL4 640 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 NAA35Q5VZE5 725 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 SMYD5Q6GMV2 418 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 BEND5Q7L4P6 421 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 TRMT11Q7Z4G4 463 aaKnown RBP18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 KBTBD6Q86V97 674 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 FAM160A2Q8N612 972 aaPredicted RBP18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 HMGB4Q8WW32 186 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 CPA5Q8WXQ8 436 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 SORCS1Q8WY21 1168 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 SLC39A13Q96H72 371 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 SLC2A13Q96QE2 648 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 BPIFA3Q9BQP9 254 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 FUCA2Q9BTY2 467 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 NUCKS1Q9H1E3 243 aaKnown RBP18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 DDIT4Q9NX09 232 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 STIM2Q9P246 746 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 BCCIPQ9P287 314 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■□□ 15.5
PTPRN2-204ENST00000404321 EBF1Q9UH73 591 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 NOCTQ9UK39 431 aaKnown RBP18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 SLC27A6Q9Y2P4 619 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 STARD13Q9Y3M8 1113 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 RAD54BQ9Y620 910 aa18.88■□□□□ 0.61
PTPRN2-204ENST00000404321 WASH3PC4AMC7 463 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 GFRA2O00451 464 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 IRAK2O43187 625 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 TBL1XO60907 577 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 HOXB2P14652 356 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 NTSR1P30989 418 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 RNASE9P60153 205 aaKnown RBP18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 CDK17Q00537 523 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 SLC6A3Q01959 620 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 ARID5AQ03989 594 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 PIK3R6Q5UE93 754 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 LAIR1Q6GTX8 287 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 KIAA1211LQ6NV74 962 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 ANKS1BQ7Z6G8 1248 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 PGBD3Q8N328 593 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 KCNV2Q8TDN2 545 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 PRICKLE1Q96MT3 831 aaPredicted RBP18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 CIPCQ9C0C6 399 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 POLMQ9NP87 494 aaPredicted RBP18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 WDR87Q6ZQQ6 2873 aa18.87■□□□□ 0.61
PTPRN2-204ENST00000404321 SMTNL1A8MU46 457 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 TEX33O43247 280 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 ALDH1A2O94788 518 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 IGLV3-25P01717 112 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 APOEP02649 317 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 GBP1P32455 592 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 CDH5P33151 784 aaPredicted RBP18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 STAT1P42224 750 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 SNX16P57768 344 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 NME3Q13232 169 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 SDE2Q6IQ49 451 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 CACNA2D4Q7Z3S7 1137 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 RASSF3Q86WH2 238 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 ERICH1Q86X53 443 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms