RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 EEFSECP57772 596 aaKnown RBP5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 FHL2Q14192 279 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 POSTNQ15063 836 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 BTBD16Q32M84 506 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 P3H1Q32P28 736 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 TSTD2Q5T7W7 516 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 RASAL3Q86YV0 1011 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 P3H2Q8IVL5 708 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 SUGP1Q8IWZ8 645 aaKnown RBP5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 SIRT6Q8N6T7 355 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 RP9Q8TA86 221 aaKnown RBP5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 STT3BQ8TCJ2 826 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 MCRS1Q96EZ8 462 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 LTV1Q96GA3 475 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 FSD1LQ9BXM9 530 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 TRIM36Q9NQ86 728 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 ADAMTS5Q9UNA0 930 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 NRXN3Q9Y4C0 1643 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 KNDC1Q76NI1 1749 aa5.71□□□□□ -1.49
HMGB3P19-201ENST00000403971 KRTAP4-8A0A0G2JLE6 195 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 IPO5O00410 1097 aaKnown RBP5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 KIAA0355O15063 1070 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 RAMP2O60895 175 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 TJP3O95049 919 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 DLDP09622 509 aaKnown RBP5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 FAM163BP0C2L3 166 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 DRD4P21917 467 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 DIO1P49895 249 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 SUMO2P61956 95 aaKnown RBP5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 BFSP2Q13515 415 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 ZRSR2Q15696 482 aaKnown RBP5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 TRIM71Q2Q1W2 868 aaKnown RBP5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 AASDHQ4L235 1098 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 PCID2Q5JVF3 399 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 RINT1Q6NUQ1 792 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 MSANTD2Q6P1R3 559 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 ANKRD16Q6P6B7 361 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 NAPRTQ6XQN6 538 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 LDHAL6AQ6ZMR3 332 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 DBX2Q6ZNG2 339 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 PIK3AP1Q6ZUJ8 805 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 PTCHD4Q6ZW05 846 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 WDR53Q7Z5U6 358 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 ABHD11Q8NFV4 315 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 SCAMP5Q8TAC9 235 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 TBC1D20Q96BZ9 403 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 EID2BQ96D98 161 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 TMEM120AQ9BXJ8 343 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 TP63Q9H3D4 680 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 MGAT4CQ9UBM8 478 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 AMFRQ9UKV5 643 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 ADGRB1O14514 1584 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 DIP2AQ14689 1571 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 ADGRF5Q8IZF2 1346 aa5.71□□□□□ -1.5
HMGB3P19-201ENST00000403971 ALKQ9UM73 1620 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 PLEKHG1Q9ULL1 1385 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 CHD2O14647 1828 aaKnown RBP5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 A0A087X1B8 175 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 A8MVJ9 347 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 ORC4O43929 436 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 RPP40O75818 363 aaKnown RBP5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 ACTL6BO94805 426 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 CER1O95813 267 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 FGAP02671 866 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 ITGA2BP08514 1039 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 NPSP0C0P6 89 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 ALADP13716 330 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 CYP4F2P78329 520 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 FOXO1Q12778 655 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 LMAN2Q12907 356 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 ST3GAL2Q16842 350 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 RNASE12Q5GAN4 147 aaKnown RBP5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 FAM90A2PQ658T7 463 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 KLHL17Q6TDP4 642 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 MRGPRGQ86SM5 289 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 AMER2Q8N7J2 671 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 SPATA5Q8NB90 893 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 MYRIPQ8NFW9 859 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 TRAPPC12Q8WVT3 735 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 NUDT22Q9BRQ3 303 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 THAP7Q9BT49 309 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 PAGR1Q9BTK6 254 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 PCED1AQ9H1Q7 454 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 SAP30LQ9HAJ7 183 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 LUZP4Q9P127 313 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 HERC5Q9UII4 1024 aaKnown RBP5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 PCDHB7Q9Y5E2 793 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 PCDHB2Q9Y5E7 798 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 ARHGEF28Q8N1W1 1705 aaKnown RBP5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 MED14O60244 1454 aa5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 SCAF11Q99590 1463 aaKnown RBP5.7□□□□□ -1.5
HMGB3P19-201ENST00000403971 ROCK2O75116 1388 aaKnown RBP5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 M0QZQ0 153 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 ZNF213O14771 459 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 SUV39H1O43463 412 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 ADRA1DP25100 572 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 GDF5P43026 501 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 GSTM5P46439 218 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 PTH2RP49190 550 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 PRKG1Q13976 671 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms