RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 EIF3DO15371 548 aaKnown RBP eCLIP12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 FSBPO95073 299 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SEMA4FO95754 770 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ACADMP11310 421 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CD27P26842 260 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 HLA-FP30511 346 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ASPAP45381 313 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ACADVLP49748 655 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 NCOA4Q13772 614 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 RTP5Q14D33 572 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 C8orf34Q49A92 452 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ZNF667Q5HYK9 610 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 C1orf220Q5T0J3 134 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 FBXL19Q6PCT2 694 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 FAM217AQ8IXS0 508 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PARD3BQ8TEW8 1205 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TSC1Q92574 1164 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TNIP3Q96KP6 325 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SLC6A18Q96N87 628 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 HNRNPABQ99729 332 aaKnown RBP12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CIPCQ9C0C6 399 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PRSS16Q9NQE7 514 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 KBTBD4Q9NVX7 518 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 FTSJ1Q9UET6 329 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 NAGPAQ9UK23 515 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SMC3Q9UQE7 1217 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 USP3Q9Y6I4 520 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ENC1O14682 589 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 JUPP14923 745 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 HOXD9P28356 352 aaPredicted RBP12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SGSHP51688 502 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TLE3Q04726 772 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 EFEMP1Q12805 493 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 HES3Q5TGS1 186 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SERPINA13PQ6UXR4 307 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 BHLHA9Q7RTU4 235 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ADIPOR2Q86V24 386 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 DENND1CQ8IV53 801 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 C12orf56Q8IXR9 622 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ZNF276Q8N554 614 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SNIP1Q8TAD8 396 aaKnown RBP12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 WFDC5Q8TCV5 224 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SAP25Q8TEE9 199 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 NDRG1Q92597 394 aaKnown RBP12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 NXPE2Q96DL1 559 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 USP28Q96RU2 1077 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CAAP1Q9H8G2 361 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 APOBEC3GQ9HC16 384 aaKnown RBP12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 RASAL2Q9UJF2 1139 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PCDHGA1Q9Y5H4 931 aa12.47□□□□□ -0.41
SPTLC1P3-201ENST00000403408 RELNP78509 3460 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 A0A1W2PR77 199 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 BRINP1O60477 761 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PHACTR2O75167 634 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CFHR1Q03591 330 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 GOLGA8FQ08AF8 430 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 GOLGA8DPQ0D2H9 430 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 BNIP3Q12983 259 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 BIRC3Q13489 604 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 KCNJ12Q14500 433 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 EIF4HQ15056 248 aaKnown RBP12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 RABEP1Q15276 862 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TEAD4Q15561 434 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 FAM26FQ5R3K3 315 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 KANSL1Q7Z3B3 1105 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CCDC186Q7Z3E2 898 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 KIAA0907Q7Z7F0 614 aaPredicted RBP12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ERICH1Q86X53 443 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 LSM14AQ8ND56 463 aaKnown RBP12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 UCMAQ8WVF2 138 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 MYO19Q96H55 970 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CNDP2Q96KP4 475 aaKnown RBP12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 DMAC2Q9NW81 257 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PCDHA5Q9Y5H7 936 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 AK5Q9Y6K8 562 aa12.46□□□□□ -0.41
SPTLC1P3-201ENST00000403408 LRRK2Q5S007 2527 aa12.46□□□□□ -0.42
SPTLC1P3-201ENST00000403408 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 VILLO15195 856 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 RFPL3O75679 317 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 LDOC1O95751 146 aaPredicted RBP12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ASS1P00966 412 aaKnown RBP12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 KRT10P13645 584 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 INCA1Q0VD86 236 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SLC39A14Q15043 492 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ZACNQ401N2 412 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CNNM4Q6P4Q7 775 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 UNC93AQ86WB7 457 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SPACA3Q8IXA5 215 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CPXM2Q8N436 756 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 EID2Q8N6I1 236 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CYFIP2Q96F07 1278 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 LMLNQ96KR4 655 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ELF4Q99607 663 aaPredicted RBP12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ARID3AQ99856 593 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 NRSN2Q9GZP1 204 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 BTBD1Q9H0C5 482 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 TNMDQ9H2S6 317 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CLIC5Q9NZA1 410 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms