RNA–Protein interactions for RNA: ENST00000402845.7

CACNA1C-221, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-221ENST00000402845 VPS51Q9UID3 782 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 MRPS17Q9Y2R5 130 aaKnown RBP11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 ARIH1Q9Y4X5 557 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 MYO3AQ8NEV4 1616 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 SUPT7LO94864 414 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 SERPINB3P29508 390 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 GRSF1Q12849 480 aaKnown RBP eCLIP11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 MMRN1Q13201 1228 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 NFYCQ13952 458 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 SETMARQ53H47 684 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 KLF6Q99612 283 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 PDGFCQ9NRA1 345 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 ZNHIT2Q9UHR6 403 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 SSU72P8A0A1W2PR75 194 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 TMEM253P0C7T8 217 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 CREMQ03060 361 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 CHRNB3Q05901 458 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 ZC2HC1CQ53FD0 456 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 TCEAL5Q5H9L2 206 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 PACS1Q6VY07 963 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 SERHL2Q9H4I8 314 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 CYLDQ9NQC7 956 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 SERHLQ9NQF3 203 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 IARS2Q9NSE4 1012 aaKnown RBP11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 TMEM120BA0PK00 339 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 MYBL2P10244 700 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 HOXC12P31275 282 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 GRK4P32298 578 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 COILP38432 576 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 WDR93Q6P2C0 686 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 NEK10Q6ZWH5 1172 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 PI4K2AQ9BTU6 479 aa11.33□□□□□ -0.6
CACNA1C-221ENST00000402845 TRIM24O15164 1050 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CLTBP09497 229 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 ACAD10Q6JQN1 1059 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 ZSCAN1Q8NBB4 408 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 PPP1R10Q96QC0 940 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 ADGRE3Q9BY15 652 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 TRIM9Q9C026 710 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CCSER1Q9C0I3 900 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 TIMM13Q9Y5L4 95 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 PDS5AQ29RF7 1337 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 IRS2Q9Y4H2 1338 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 TULP4Q9NRJ4 1543 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 TPD52L2O43399 206 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 GAS2O43903 313 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 FARP2O94887 1054 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 ZSWIM7Q19AV6 140 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 SGMS1Q86VZ5 419 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 GPC2Q8N158 579 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 ZNF655Q8N720 491 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 FAM45AQ8TCE6 357 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 SGF29Q96ES7 293 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 HDHD2Q9H0R4 259 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CARD9Q9H257 536 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 A0A1W2PQJ5 194 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 ZNF682O95780 498 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 ITGB6P18564 788 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 TALDO1P37837 337 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 DENND1BQ6P3S1 775 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CYP20A1Q6UW02 462 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 B3GALNT2Q8NCR0 500 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CD99L2Q8TCZ2 262 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 INTS13Q9NVM9 706 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 DRG1Q9Y295 367 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 DLC1Q96QB1 1528 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 UMPSP11172 480 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CYP2A6P11509 494 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 PTPN1P18031 435 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 POU1F1P28069 291 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 ALG11Q2TAA5 492 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 SERPINA13PQ6UXR4 307 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 SERPINB12Q96P63 405 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 MIEF1Q9NQG6 463 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 SPEF1Q9Y4P9 236 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 AP4S1Q9Y587 144 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 RAD54BQ9Y620 910 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 SLC9A3R1O14745 358 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 EIF3HO15372 352 aaKnown RBP eCLIP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 RAD51CO43502 376 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 THRAP10827 490 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 TFE3P19532 575 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 GARTP22102 1010 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CCNG1P51959 295 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CCINQ13939 588 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 TRIM16LQ309B1 348 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 XRRA1Q6P2D8 792 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 OR8H2Q8N162 312 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CCT8L2Q96SF2 557 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 KCTD14Q9BQ13 255 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 SIKE1Q9BRV8 207 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 ANKEF1Q9NU02 776 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 DNTTP04053 509 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 RAB27AP51159 221 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 NME5P56597 212 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 GRIK3Q13003 919 aa11.32□□□□□ -0.6
CACNA1C-221ENST00000402845 CUL2Q13617 745 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms