RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 TRIP4Q15650 581 aaPredicted RBP27.89■■■□□ 2.05
CGREF1-204ENST00000402550 HADHQ16836 314 aaKnown RBP27.89■■■□□ 2.05
CGREF1-204ENST00000402550 SCYL2Q6P3W7 929 aa27.89■■■□□ 2.05
CGREF1-204ENST00000402550 BNIPLQ7Z465 357 aa27.89■■■□□ 2.05
CGREF1-204ENST00000402550 LRRC57Q8N9N7 239 aa27.89■■■□□ 2.05
CGREF1-204ENST00000402550 BPIFB1Q8TDL5 484 aa27.89■■■□□ 2.05
CGREF1-204ENST00000402550 IRX2Q9BZI1 471 aaPredicted RBP27.89■■■□□ 2.05
CGREF1-204ENST00000402550 PIGVQ9NUD9 493 aa27.89■■■□□ 2.05
CGREF1-204ENST00000402550 PRPSAP2O60256 369 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 PSMC3P17980 439 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 CCR1P32246 355 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 ZNF77Q15935 545 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 OTUD1Q5VV17 481 aaPredicted RBP27.88■■■□□ 2.05
CGREF1-204ENST00000402550 PEX26Q7Z412 305 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 RNF135Q8IUD6 432 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 TTC16Q8NEE8 873 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 ADAM33Q9BZ11 813 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 GOLPH3Q9H4A6 298 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 WDCPQ9H6R7 721 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 AMFRQ9UKV5 643 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 NCOR1O75376 2440 aa27.88■■■□□ 2.05
CGREF1-204ENST00000402550 FCHO2Q0JRZ9 810 aa27.87■■■□□ 2.05
CGREF1-204ENST00000402550 ARL13BQ3SXY8 428 aa27.87■■■□□ 2.05
CGREF1-204ENST00000402550 ZNF569Q5MCW4 686 aa27.87■■■□□ 2.05
CGREF1-204ENST00000402550 SLFN11Q7Z7L1 901 aa27.87■■■□□ 2.05
CGREF1-204ENST00000402550 DDX42Q86XP3 938 aaKnown RBP eCLIP27.87■■■□□ 2.05
CGREF1-204ENST00000402550 UBE2Q2Q8WVN8 375 aa27.87■■■□□ 2.05
CGREF1-204ENST00000402550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.87■■■□□ 2.05
CGREF1-204ENST00000402550 CALCOCO1Q9P1Z2 691 aa27.87■■■□□ 2.05
CGREF1-204ENST00000402550 CFAP97Q9P2B7 532 aa27.87■■■□□ 2.05
CGREF1-204ENST00000402550 USP18Q9UMW8 372 aa27.87■■■□□ 2.05
CGREF1-204ENST00000402550 APOEP02649 317 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 MIPP30301 263 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 RING1Q06587 406 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 DAB2IPQ5VWQ8 1189 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 FAM131BQ86XD5 332 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 DEPDC1BQ8WUY9 529 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 WBP2Q969T9 261 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 PLD4Q96BZ4 506 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 UHRF1Q96T88 793 aaPredicted RBP27.86■■■□□ 2.05
CGREF1-204ENST00000402550 SLC12A6Q9UHW9 1150 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 TRIOO75962 3097 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 HMBSP08397 361 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 HARS2P49590 506 aaKnown RBP27.86■■■□□ 2.05
CGREF1-204ENST00000402550 CXCR3P49682 368 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 ATXN1P54253 815 aaKnown RBP27.86■■■□□ 2.05
CGREF1-204ENST00000402550 USP4Q13107 963 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 MTA1Q13330 715 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 EIF4EBP2Q13542 120 aaPredicted RBP27.86■■■□□ 2.05
CGREF1-204ENST00000402550 TDGQ13569 410 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 GRM2Q14416 872 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 PPP2R5DQ14738 602 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 BRMS1LQ5PSV4 323 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 NUGGCQ68CJ6 796 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 UNC45BQ8IWX7 931 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 TRMT61BQ9BVS5 477 aaKnown RBP27.86■■■□□ 2.05
CGREF1-204ENST00000402550 PCSK1NQ9UHG2 260 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 HYOU1Q9Y4L1 999 aa27.86■■■□□ 2.05
CGREF1-204ENST00000402550 STC2O76061 302 aa27.85■■■□□ 2.05
CGREF1-204ENST00000402550 GNG11P61952 73 aa27.85■■■□□ 2.05
CGREF1-204ENST00000402550 ZC3H12AQ5D1E8 599 aaKnown RBP27.85■■■□□ 2.05
CGREF1-204ENST00000402550 ARFGAP1Q8N6T3 406 aa27.85■■■□□ 2.05
CGREF1-204ENST00000402550 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.85■■■□□ 2.05
CGREF1-204ENST00000402550 GREM1O60565 184 aa27.84■■■□□ 2.05
CGREF1-204ENST00000402550 FTCDO95954 541 aa27.84■■■□□ 2.05
CGREF1-204ENST00000402550 KRT7P08729 469 aa27.84■■■□□ 2.05
CGREF1-204ENST00000402550 IRF1P10914 325 aa27.84■■■□□ 2.05
CGREF1-204ENST00000402550 AIF1P55008 147 aa27.84■■■□□ 2.05
CGREF1-204ENST00000402550 HTR3DQ70Z44 454 aa27.84■■■□□ 2.05
CGREF1-204ENST00000402550 RHOT1Q8IXI2 618 aa27.84■■■□□ 2.05
CGREF1-204ENST00000402550 SLC39A13Q96H72 371 aa27.84■■■□□ 2.05
CGREF1-204ENST00000402550 THG1LQ9NWX6 298 aaKnown RBP27.84■■■□□ 2.05
CGREF1-204ENST00000402550 SH3BP1Q9Y3L3 701 aa27.84■■■□□ 2.05
CGREF1-204ENST00000402550 E2F8A0AVK6 867 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 TNNT1P13805 278 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 RAB6CQ53S08 254 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 BOLA3Q53S33 107 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 ZFYVE27Q5T4F4 411 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 NT5DC3Q86UY8 548 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 YAF2Q8IY57 180 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 FCRL2Q96LA5 508 aaPredicted RBP27.83■■■□□ 2.05
CGREF1-204ENST00000402550 TKTL2Q9H0I9 626 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 RAB6CQ9H0N0 254 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 LSM7Q9UK45 103 aaKnown RBP27.83■■■□□ 2.05
CGREF1-204ENST00000402550 SORCS3Q9UPU3 1222 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 BDP1A6H8Y1 2624 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 MUC3AQ02505 3323 aa27.83■■■□□ 2.05
CGREF1-204ENST00000402550 PSTPIP1O43586 416 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 IGLV3-27P01718 113 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 KLKB1P03952 638 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 SLC35F6Q8N357 371 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 KIAA1958Q8N8K9 716 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 ATP6V0D2Q8N8Y2 350 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 NTAN1Q96AB6 310 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 DCLK3Q9C098 648 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 ZWILCHQ9H900 591 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 JRKLQ9Y4A0 524 aa27.82■■■□□ 2.04
CGREF1-204ENST00000402550 MIF4GDA9UHW6 222 aaKnown RBP27.82■■■□□ 2.04
CGREF1-204ENST00000402550 SCAMP3O14828 347 aaKnown RBP27.82■■■□□ 2.04
CGREF1-204ENST00000402550 CHADO15335 359 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms