RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 CRLF3Q8IUI8 442 aa17.58■□□□□ 0.41
SNRNP70-202ENST00000401730 ADGRF2Q8IZF7 708 aa17.58■□□□□ 0.41
SNRNP70-202ENST00000401730 DCPSQ96C86 337 aaKnown RBP17.58■□□□□ 0.41
SNRNP70-202ENST00000401730 SIGLEC10Q96LC7 697 aa17.58■□□□□ 0.41
SNRNP70-202ENST00000401730 KCTD15Q96SI1 283 aaPredicted RBP17.58■□□□□ 0.41
SNRNP70-202ENST00000401730 DCLRE1BQ9H816 532 aa17.58■□□□□ 0.41
SNRNP70-202ENST00000401730 DNAJC16Q9Y2G8 782 aa17.58■□□□□ 0.41
SNRNP70-202ENST00000401730 KRT38O76015 456 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 GABRB2P47870 512 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 STX3Q13277 289 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 FASTKD1Q53R41 847 aaKnown RBP17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 N4BP2L1Q5TBK1 243 aaPredicted RBP17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 ZNF534Q76KX8 674 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 CATSPER4Q7RTX7 472 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 STKLD1Q8NE28 680 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 SLC2A14Q8TDB8 520 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 SAR1AQ9NR31 198 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 A0A1B0GVG6 124 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 PDE5AO76074 875 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 C1QAP02745 245 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 C6orf222P0C671 652 aaPredicted RBP17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 UBTFL6P0CB48 400 aaPredicted RBP17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 VAV1P15498 845 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 L1CAMP32004 1257 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 KLC1Q07866 573 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 SH3D19Q5HYK7 790 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 LGSNQ5TDP6 509 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 LENG1Q96BZ8 264 aaPredicted RBP17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 PNPOQ9NVS9 261 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 CNTN3Q9P232 1028 aa17.58■□□□□ 0.4
SNRNP70-202ENST00000401730 TPP1O14773 563 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 MCF2P10911 925 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 NCF2P19878 526 aaPredicted RBP17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 PPCSQ9HAB8 311 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 DTLQ9NZJ0 730 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 H3BRB1 525 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 ENDOD1O94919 500 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 PSMG1O95456 288 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 WASHC2DQ5SRD0 308 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 COLGALT1Q8NBJ5 622 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 CSPG4P5Q96PW8 444 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 EBNA1BP2Q99848 306 aaKnown RBP17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 OXCT2Q9BYC2 517 aaPredicted RBP17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 TUT1Q9H6E5 874 aaKnown RBP17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 ARHGEF4Q9NR80 690 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 DOCK1Q14185 1865 aa17.57■□□□□ 0.4
SNRNP70-202ENST00000401730 A6NHS1 94 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 PSMB4P28070 264 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 ATXN3P54252 364 aaPredicted RBP17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 RALGPS1Q5JS13 557 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 GSDMBQ8TAX9 411 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 TRIM4Q9C037 500 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 PHACTR1Q9C0D0 580 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 CYP3A43Q9HB55 503 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 SSU72Q9NP77 194 aaKnown RBP17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 CITO14578 2027 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 NDC80O14777 642 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 ZCCHC18P0CG32 403 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 TNFAIP2Q03169 654 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 ARHGAP1Q07960 439 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 DLG2Q15700 870 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 C1orf146Q5VVC0 180 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 ATG14Q6ZNE5 492 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 FBXO41Q8TF61 875 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 MPHOSPH6Q99547 160 aaKnown RBP17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 ASB7Q9H672 318 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 CAB39LQ9H9S4 337 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 STOML1Q9UBI4 398 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 PARP14Q460N5 1801 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 ATP9BO43861 1147 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 MFSD11O43934 449 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 TPH1P17752 444 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 PRAMEF19Q5SWL8 479 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 DEFB106AQ8N104 65 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 GSTCDQ8NEC7 633 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 OPTNQ96CV9 577 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 FRMD8P1Q9BZ68 369 aaPredicted RBP17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 SNX10Q9Y5X0 201 aa17.56■□□□□ 0.4
SNRNP70-202ENST00000401730 GAS2O43903 313 aaKnown RBP17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 WFS1O76024 890 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 RARBP10826 455 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 CD1EP15812 388 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 PDK2Q15119 407 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 PID1Q7Z2X4 250 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 KBTBD2Q8IY47 623 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 SLC35F5Q8WV83 523 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 PYDC1Q8WXC3 89 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 LNPEPQ9UIQ6 1025 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 SPTLC1O15269 473 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 SULT1E1P49888 294 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 RAB27AP51159 221 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 ADIGQ0VDE8 80 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 USP4Q13107 963 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 ATG16L1Q676U5 607 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 LRRC74BQ6ZQY2 392 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 CHSY1Q86X52 802 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 C10orf107Q8IVU9 208 aa17.55■□□□□ 0.4
SNRNP70-202ENST00000401730 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.55■□□□□ 0.47e-7■■■■■ 43.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms