RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 GIT2Q14161 759 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 DSG4Q86SJ6 1040 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 PARP8Q8N3A8 854 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 C2orf73Q8N5S3 287 aaPredicted RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 ANKS1AQ92625 1134 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 COPS5Q92905 334 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 LPPQ93052 612 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 LOC102724159A0A0B4J2E5 919 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 IL1R1P14778 569 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 ERVK-24P63145 666 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 GRIK3Q13003 919 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 PWP2Q15269 919 aaKnown RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 CCDC149Q6ZUS6 474 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 R3HCC1LQ7Z5L2 792 aaKnown RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 MTDHQ86UE4 582 aaKnown RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 FNDC5Q8NAU1 212 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 CAMKK2Q96RR4 588 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 VTA1Q9NP79 307 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 PAIP2BQ9ULR5 123 aaKnown RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 SIK3Q9Y2K2 1263 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 MYPNQ86TC9 1320 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 GPR75-ASB3A0A0A6YYF3 556 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 KCNK1O00180 336 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 IFNA16P05015 189 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 CCR1P32246 355 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 TAF13Q15543 124 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 ZSWIM7Q19AV6 140 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 POTEAQ6S8J7 498 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 CXCL17Q6UXB2 119 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 ADGRA1Q86SQ6 560 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 WDR36Q8NI36 951 aaKnown RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 TMEM120AQ9BXJ8 343 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 TRIM8Q9BZR9 551 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 NMRK1Q9NWW6 199 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 FAM50BQ9Y247 325 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 SLC27A5Q9Y2P5 690 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 SCAMP1O15126 338 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 SEC22BO75396 215 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 TSPAN8P19075 237 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 CTNNB1P35222 781 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 P2RX7Q99572 595 aaKnown RBP14.09□□□□□ -0.15
VAPA-202ENST00000400000 SYT15Q9BQS2 421 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 ZSWIM1Q9BR11 485 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 KCND2Q9NZV8 630 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 ZNF112Q9UJU3 913 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 HES2Q9Y543 173 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 LRRC7Q96NW7 1537 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 A2ML1A8K2U0 1454 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 LACTBL1A8MY62 500 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 NT5C1B-RDH14C9J2C7 533 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 KRT16P08779 473 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 KLC1Q07866 573 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 PKN1Q16512 942 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 SEL1L3Q68CR1 1132 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 ARHGEF19Q8IW93 802 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 SEMA6BQ9H3T3 888 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 VPS45Q9NRW7 570 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 DCDC2Q9UHG0 476 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 CHRNB3Q05901 458 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 DYNC1I2Q13409 638 aaKnown RBP14.09□□□□□ -0.15
VAPA-202ENST00000400000 MAPK11Q15759 364 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 SLC44A4Q53GD3 710 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 FBXO47Q5MNV8 452 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 IZUMO1Q8IYV9 350 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 PAFAH2Q99487 392 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 SAE1Q9UBE0 346 aaPredicted RBP14.09□□□□□ -0.15
VAPA-202ENST00000400000 ERCC6L2Q5T890 1561 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 TISP43B9A030 160 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 H3BN98 237 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 CLTBP09497 229 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 TYMPP19971 482 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 PLA2G4EQ3MJ16 856 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 MILR1Q7Z6M3 343 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 ATP8B4Q8TF62 1192 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 FAM120BQ96EK7 910 aaKnown RBP14.09□□□□□ -0.15
VAPA-202ENST00000400000 SEMA6AQ9H2E6 1030 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 LYVE1Q9Y5Y7 322 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 FAM20BO75063 409 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 SERPINB1P30740 379 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 EPS8Q12929 822 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 TSC22D1Q15714 1073 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 CNGA2Q16280 664 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 AGGF1Q8N302 714 aaeCLIP14.09□□□□□ -0.15
VAPA-202ENST00000400000 OLFM1Q99784 485 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 STMN3Q9NZ72 180 aa14.09□□□□□ -0.15
VAPA-202ENST00000400000 KRT75O95678 551 aa14.08□□□□□ -0.15
VAPA-202ENST00000400000 IRX1P78414 480 aaPredicted RBP14.08□□□□□ -0.15
VAPA-202ENST00000400000 CYP24A1Q07973 514 aa14.08□□□□□ -0.15
VAPA-202ENST00000400000 COX10Q12887 443 aa14.08□□□□□ -0.15
VAPA-202ENST00000400000 FSCN1Q16658 493 aaKnown RBP14.08□□□□□ -0.15
VAPA-202ENST00000400000 SETMARQ53H47 684 aaPredicted RBP14.08□□□□□ -0.15
VAPA-202ENST00000400000 ERMARDQ5T6L9 678 aa14.08□□□□□ -0.15
VAPA-202ENST00000400000 CYP2R1Q6VVX0 501 aa14.08□□□□□ -0.15
VAPA-202ENST00000400000 CYP4Z1Q86W10 505 aa14.08□□□□□ -0.15
VAPA-202ENST00000400000 SYBUQ9NX95 663 aa14.08□□□□□ -0.15
VAPA-202ENST00000400000 SPATA2Q9UM82 520 aa14.08□□□□□ -0.15
VAPA-202ENST00000400000 PSMB9P28065 219 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 ADAM2Q99965 735 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 TBC1D23Q9NUY8 699 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 SSU72P8A0A1W2PR75 194 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms