RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 FAM163AQ96GL9 167 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 ABHD8Q96I13 439 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 P2RX7Q99572 595 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 CGRRF1Q99675 332 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 VPS33BQ9H267 617 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CAPN10Q9HC96 672 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TLR8Q9NR97 1041 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 INTS13Q9NVM9 706 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SMPD4Q9NXE4 827 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PKD2L2Q9NZM6 624 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ARMCX1Q9P291 453 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ITGA11Q9UKX5 1188 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 KMT2EQ8IZD2 1858 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MRC1P22897 1456 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 RCCD1A6NED2 376 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 EVPLLA8MZ36 301 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CBX4O00257 560 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ZNF197O14709 1029 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SCAMP3O14828 347 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 IRF6O14896 467 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 KATNA1O75449 491 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 YBX3P16989 372 aaKnown RBP eCLIP3.34□□□□□ -1.87
KNL1-202ENST00000399668 SCNN1BP51168 640 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ITGA9Q13797 1035 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 KRT72Q14CN4 511 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 FSCN1Q16658 493 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 ZC3H12BQ5HYM0 836 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 AARS2Q5JTZ9 985 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 OVOS1Q6IE37 1185 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 UGT3A1Q6NUS8 523 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 C4orf22Q6V702 233 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 MOB2Q70IA6 237 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 TLK2Q86UE8 772 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 KIAA0319LQ8IZA0 1049 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 AGGF1Q8N302 714 aaeCLIP3.34□□□□□ -1.87
KNL1-202ENST00000399668 CERS5Q8N5B7 392 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CATSPER1Q8NEC5 780 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SLC16A10Q8TF71 515 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ZNF333Q96JL9 665 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 MTMR9Q96QG7 549 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 GAD1Q99259 594 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 FAM129AQ9BZQ8 928 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 A1CFQ9NQ94 594 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 GID8Q9NWU2 228 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 KIAA1257Q9ULG3 409 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PATJQ8NI35 1801 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CACNA1GO43497 2377 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SLIT3O75094 1523 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PDE2AO00408 941 aaPredicted RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 PARNO95453 639 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 BGNP21810 368 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 TUBP50607 506 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 RHBDL3P58872 404 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 TIGD7Q6NT04 549 aaPredicted RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 POTEAQ6S8J7 498 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 KCNT2Q6UVM3 1135 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 NPNTQ6UXI9 565 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 HORMAD1Q86X24 394 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SCUBE1Q8IWY4 988 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.34□□□□□ -1.87
KNL1-202ENST00000399668 ZBTB10Q96DT7 871 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SERAC1Q96JX3 654 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PAFAH2Q99487 392 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PDCD2LQ9BRP1 358 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 NAT9Q9BTE0 207 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 TMEM106CQ9BVX2 250 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CIPCQ9C0C6 399 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 TKTL2Q9H0I9 626 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PORCNQ9H237 461 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 NEUROG2Q9H2A3 272 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 LRRC40Q9H9A6 602 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CHCHD3Q9NX63 227 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 CRLS1Q9UJA2 301 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ZNF229Q9UJW7 825 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CDV3Q9UKY7 258 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 FAM50BQ9Y247 325 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 DISP2A7MBM2 1401 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PKDREJQ9NTG1 2253 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 RBBP6Q7Z6E9 1792 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 A0A0B4J269 797 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 NR5A2O00482 541 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 TIMM44O43615 452 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CLASP2O75122 1294 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 TRIM16O95361 564 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 LSM8O95777 96 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 PYGLP06737 847 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 MAPTP10636 758 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 EPB42P16452 691 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SP100P23497 879 aaPredicted RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 ELK3P41970 407 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SERPINB8P50452 374 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PWP1Q13610 501 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CTXN3Q4LDR2 81 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 AGKQ53H12 422 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ACBD5Q5T8D3 534 aaPredicted RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 TEDDM1Q5T9Z0 273 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 MFSD7Q6UXD7 560 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 KDM7AQ6ZMT4 941 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ZCCHC23Q6ZST2 131 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 COPS5Q92905 334 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms