RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SLC30A5Q8TAD4 765 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ATRIPQ8WXE1 791 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 HHIPQ96QV1 700 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PCDHB18PQ96TA0 734 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TRIM62Q9BVG3 475 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ASNSD1Q9NWL6 643 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 XPO7Q9UIA9 1087 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FBXO10Q9UK96 956 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 HCN2Q9UL51 889 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SLC8A2Q9UPR5 921 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PIEZO1Q92508 2521 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 KIAA1549LQ6ZVL6 1849 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PRRT4C9JH25 899 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 GOLGA6L19H0YKK7 550 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 GFRA2O00451 464 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 IRAK2O43187 625 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ACSL4O60488 711 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CAVIN2O95810 425 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CYBBP04839 570 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TNFRSF4P43489 277 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TPM4P67936 248 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NNTQ13423 1086 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 EIF4EBP2Q13542 120 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DMC1Q14565 340 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ZC3H14Q6PJT7 736 aaKnown RBP14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ASCL5Q7RTU5 278 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 BAP1Q92560 729 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NKD2Q969F2 451 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TMA16Q96EY4 203 aaKnown RBP14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 MYEOVQ96EZ4 313 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ADAM33Q9BZ11 813 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DDIT4Q9NX09 232 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CALCOCO1Q9P1Z2 691 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PCDHGA2Q9Y5H1 932 aa14.65□□□□□ -0.06
HLA-DQB1-202ENST00000399079 A0A1W2PQC6 194 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 GOLGA8SH3BPF8 625 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SGK1O00141 431 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 KLF8O95600 359 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 LATS1O95835 1130 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TFE3P19532 575 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 HOXD9P28356 352 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SLC11A2P49281 568 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 NRLP54845 237 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MRPS21P82921 87 aaKnown RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CDK17Q00537 523 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MPPE1Q53F39 396 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 FAM102AQ5T9C2 384 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MMS22LQ6ZRQ5 1243 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 IRF2BP2Q7Z5L9 587 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 PHLDB2Q86SQ0 1253 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ZDHHC17Q8IUH5 632 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ZNF513Q8N8E2 541 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TXNDC5Q8NBS9 432 aaKnown RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ZNF397Q8NF99 534 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CCDC26Q8TAB7 109 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ACDQ96AP0 544 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 FAM126AQ9BYI3 521 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 NUCKS1Q9H1E3 243 aaKnown RBP14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 FAM204AQ9H8W3 233 aa14.64□□□□□ -0.07
HLA-DQB1-202ENST00000399079 LRRC53A6NM62 1247 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 LILRB5O75023 590 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ADAM23O75077 832 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 DAB1O75553 588 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 UNGP13051 313 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 HNRNPLP14866 589 aaKnown RBP eCLIP14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 NOS2P35228 1153 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MATKP42679 507 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 UBASH3AP57075 661 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 NME3Q13232 169 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SRSF5Q13243 272 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 GEN1Q17RS7 908 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 PREPLQ4J6C6 727 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 PIK3R6Q5UE93 754 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 OTUD1Q5VV17 481 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 EGFLAMQ63HQ2 1017 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TMEM92Q6UXU6 159 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 NUDT18Q6ZVK8 323 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 AZIN2Q96A70 460 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ACOX2Q99424 681 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 C11orf70Q9BRQ4 267 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TTYH3Q9C0H2 523 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SEPT11Q9NVA2 429 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MMP17Q9ULZ9 603 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CFAP54Q96N23 3096 aa14.63□□□□□ -0.07
HLA-DQB1-202ENST00000399079 FANCMQ8IYD8 2048 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 PRR23AA6NEV1 266 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 M0QYT0 321 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 GFRA3O60609 400 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 APOEP02649 317 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 FERP16591 822 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MMP8P22894 467 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 FLT3P36888 993 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 WASP42768 502 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CRY1Q16526 586 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CLEC16AQ2KHT3 1053 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 E4F1Q66K89 784 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TRNP1Q6NT89 227 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MSANTD4Q8NCY6 345 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 WFDC5Q8TCV5 224 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ERLEC1Q96DZ1 483 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms