RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 TRIM13O60858 407 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ERBB2P04626 1255 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 STAG3L1P0CL83 205 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 FDFT1P37268 417 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 GP5P40197 560 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ABCE1P61221 599 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CNTN2Q02246 1040 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 PLOD1Q02809 727 aaPredicted RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 PTK2BQ14289 1009 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 GLRA4Q5JXX5 417 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 GRAMD4Q6IC98 578 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 AAGABQ6PD74 315 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ZPBP2Q6X784 338 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ARCQ7LC44 396 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ARPINQ7Z6K5 226 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SNRNP25Q9BV90 132 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 UBP1Q9NZI7 540 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 RIPK3Q9Y572 518 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SIN3BO75182 1162 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 TNFAIP8O95379 198 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 TOP3BO95985 862 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ZNF143P52747 638 aaPredicted RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ACAP1Q15027 740 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 PDK1Q15118 436 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 HABP4Q5JVS0 413 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 KLC3Q6P597 504 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SETD3Q86TU7 594 aaPredicted RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SATL1Q86VE3 508 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 DDI1Q8WTU0 396 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CCDC138Q96M89 665 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 MRPL46Q9H2W6 279 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 PFDN4Q9NQP4 134 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CHCHD3Q9NX63 227 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 BTBD7Q9P203 1132 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 WARS2Q9UGM6 360 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 AK5Q9Y6K8 562 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 PLCH1Q4KWH8 1693 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 TMCC1O94876 653 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CSH1P0DML2 217 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CSH2P0DML3 217 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 NELFEP18615 380 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 FGFR3P22607 806 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 RPL5P46777 297 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SERPINB8P50452 374 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SPDYE2Q495Y8 402 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 TMEM63BQ5T3F8 832 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SH3PXD2AQ5TCZ1 1133 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ARMCX2Q7L311 632 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 PTAR1Q7Z6K3 402 aaPredicted RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ZNF786Q8N393 782 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 RNF169Q8NCN4 708 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 HTR3CQ8WXA8 447 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CLEC4DQ8WXI8 215 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 VPS39Q96JC1 886 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 NTPCRQ9BSD7 190 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 TSPYL2Q9H2G4 693 aaPredicted RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 MRPL40Q9NQ50 206 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 IARS2Q9NSE4 1012 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 EFR3BQ9Y2G0 817 aa11.43□□□□□ -0.58
CSGALNACT1-202ENST00000397998 COL18A1P39060 1754 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 TRAFD1O14545 582 aaPredicted RBP11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 TPH1P17752 444 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ACO1P21399 889 aaKnown RBP11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 TPI1P60174 286 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 STILQ15468 1287 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 PPM1JQ5JR12 505 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 B3GNT6Q6ZMB0 384 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CDHR3Q6ZTQ4 885 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SAMD7Q7Z3H4 446 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 BHLHE22Q8NFJ8 381 aaPredicted RBP11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 PBXIP1Q96AQ6 731 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CPB2Q96IY4 423 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 DNAJC1Q96KC8 554 aaKnown RBP11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 DCUN1D5Q9BTE7 237 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CDH22Q9UJ99 828 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 RUVBL2Q9Y230 463 aaKnown RBP11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ZNF541Q9H0D2 1346 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SMIM31A0A1B0GVY4 71 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 EEF2KO00418 725 aaKnown RBP11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CSPG5O95196 566 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 MPP3Q13368 585 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 Q3C1V9 767 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 ARL13BQ3SXY8 428 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CYP2R1Q6VVX0 501 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 FAM183BPQ6ZVS7 135 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 TTC39CQ8N584 583 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 BEST2Q8NFU1 509 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 DIS3LQ8TF46 1054 aaKnown RBP11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CYGBQ8WWM9 190 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SKA1Q96BD8 255 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 NAT9Q9BTE0 207 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 SPATA16Q9BXB7 569 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 FSD1LQ9BXM9 530 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 WDR55Q9H6Y2 383 aaPredicted RBP11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 GPAMQ9HCL2 828 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 CYP4F12Q9HCS2 524 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 GALNT8Q9NY28 637 aa11.42□□□□□ -0.58
CSGALNACT1-202ENST00000397998 FZD1Q9UP38 647 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms