RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 KRT37O76014 449 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 C1QAP02745 245 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 SNRPAP09012 282 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 ALOX15P16050 662 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 CLCN2P51788 898 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 ALDH18A1P54886 795 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 AQP5P55064 265 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 FAM102AQ5T9C2 384 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 ACO2Q99798 780 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 ADPGKQ9BRR6 497 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 MRPS26Q9BYN8 205 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 PFDN4Q9NQP4 134 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 SMYD2Q9NRG4 433 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 GGA3Q9NZ52 723 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 GPRC5DQ9NZD1 345 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 THEGQ9P2T0 379 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 LCTP09848 1927 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 BOLA2-SMG1P6H3BVE0 249 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 KLF11O14901 512 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 MED7O43513 233 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 STIP1P31948 543 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 IRX4P78413 519 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 C15orf59Q2T9L4 293 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 NOL9Q5SY16 702 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 LPCAT4Q643R3 524 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 GRAMD4Q6IC98 578 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 DNAJC14Q6Y2X3 702 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 TSHZ1Q6ZSZ6 1077 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 ZFP28Q8NHY6 868 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 KCNN1Q92952 543 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 HSPBAP1Q96EW2 488 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 ABHD8Q96I13 439 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 PCYT2Q99447 389 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 TEX13BQ9BXU2 312 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 NIFKQ9BYG3 293 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 SDCBP2Q9H190 292 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 LHX5Q9H2C1 402 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 ACAD9Q9H845 621 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 TAGLN3Q9UI15 199 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 CPSF3Q9UKF6 684 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 AFG3L2Q9Y4W6 797 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 HEY1Q9Y5J3 304 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 WDR90Q96KV7 1748 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 TMEM247A6NEH6 219 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 CHADO15335 359 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 SPAG6O75602 509 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 GRAP2O75791 330 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 TOP3BO95985 862 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 IL1BP01584 269 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 TNNC2P02585 160 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 PRKCBP05771 671 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 HOXD12P35452 270 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 PPIDQ08752 370 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 ZCCHC23Q6ZST2 131 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 NUDCD3Q8IVD9 361 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 LRRC71Q8N4P6 559 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 SLC25A41Q8N5S1 370 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 POPDC2Q9HBU9 364 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 GPATCH2LQ9NWQ4 482 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 TMED5Q9Y3A6 229 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 KANSL1LA0AUZ9 987 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 SPDYE16A6NNV3 312 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 M0QYV0 167 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 TRMUO75648 421 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 RFPL1O75677 317 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 MICAL2O94851 1124 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 APRTP07741 180 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 COG7P83436 770 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 FOLH1Q04609 750 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 GRM1Q13255 1194 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 TMEM132AQ24JP5 1023 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 ATG16L1Q676U5 607 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 BORAQ6PGQ7 559 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 Q6ZNX1 250 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 METTL25Q8N6Q8 603 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 RNF149Q8NC42 400 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 ICA1LQ8NDH6 482 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 UBA3Q8TBC4 463 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 C7orf26Q96N11 449 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 RILPQ96NA2 401 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 C20orf27Q9GZN8 174 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 PLAC1Q9HBJ0 212 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 PPP2R3BQ9Y5P8 575 aa16.47■□□□□ 0.23
CHMP1A-201ENST00000397901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 MEI4A8MW99 385 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 PEX1O43933 1283 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 CSH1P0DML2 217 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 CSH2P0DML3 217 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 OSBPP22059 807 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 RBL1P28749 1068 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 ACADVLP49748 655 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 PDE1BQ01064 536 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 UBAP2LQ14157 1087 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 LPIN1Q14693 890 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 STXBP2Q15833 593 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms