RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 C10orf120Q5SQS8 335 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 TADA2BQ86TJ2 420 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 RFX6Q8HWS3 928 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 TTC13Q8NBP0 860 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 CCDC26Q8TAB7 109 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 HDAC7Q8WUI4 952 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 C1orf54Q8WWF1 131 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 EPC1Q9H2F5 836 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 NKX2-4Q9H2Z4 354 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 PLEKHA4Q9H4M7 779 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 AMACRQ9UHK6 382 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 TBX18O95935 607 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 TUBBP07437 444 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 HOXA9P31269 272 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 PTGIRP43119 386 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 NRG1Q02297 640 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 DPYSQ14117 519 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 TAF12Q16514 161 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 CCDC137Q6PK04 289 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 MAATS1Q7Z4T9 603 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 PLD5Q8N7P1 536 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 SLC35B2Q8TB61 432 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 MICAL1Q8TDZ2 1067 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 ATG4AQ8WYN0 398 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 NKD2Q969F2 451 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 ZNF334Q9HCZ1 680 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 STIM2Q9P246 746 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 DMGDHQ9UI17 866 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 RAB21Q9UL25 225 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 HBS1LQ9Y450 684 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 H3BRJ5 948 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 LIASO43766 372 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 OAS1P00973 400 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 LRG1P02750 347 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 GOT1P17174 413 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 TGM2P21980 687 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 ARL4AP40617 200 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 KPNA1P52294 538 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 TBX4P57082 545 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 HECTD3Q5T447 861 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 ARTNQ5T4W7 220 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 WDR93Q6P2C0 686 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 TMC8Q8IU68 726 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 ACTL9Q8TC94 416 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 PNKPQ96T60 521 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 MAK16Q9BXY0 300 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 DNMT3LQ9UJW3 386 aa20.18■□□□□ 0.82
PDLIM2-205ENST00000397761 CHD5Q8TDI0 1954 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 FAM187AA6NFU0 413 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 FAM72CH0Y354 149 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 ZMYND10O75800 440 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 ZFXP17010 805 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 HTR7P34969 479 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 ATP5C1P36542 298 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 DR1Q01658 176 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 OASLQ15646 514 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 PABPC1LQ4VXU2 614 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 FAM72AQ5TYM5 149 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 PPP2R2DQ66LE6 453 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 FAM72DQ6L9T8 149 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 FAM72BQ86X60 149 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 TDHQ8IZJ6 230 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 SEC14L1Q92503 715 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 RNF34Q969K3 372 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 C1orf74Q96LT6 269 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 PARD6BQ9BYG5 372 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 ARHGEF4Q9NR80 690 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 OR12D3Q9UGF7 316 aa20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 DRG1Q9Y295 367 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-205ENST00000397761 C2orf16Q68DN1 1984 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 SZT2Q5T011 3432 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 APOL1O14791 398 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 PAGE1O75459 146 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 PAPLNO95428 1278 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 OLFM2O95897 454 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 POU2F2P09086 479 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 EPHA5P54756 1037 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 DYNLT1P63172 113 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 OTUD4Q01804 1114 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 MTA1Q13330 715 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 PPM1LQ5SGD2 360 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 MANEALQ5VSG8 457 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 RFX8Q6ZV50 586 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 MAN1C1Q9NR34 630 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 FEZ2Q9UHY8 353 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 NEU3Q9UQ49 428 aa20.16■□□□□ 0.82
PDLIM2-205ENST00000397761 SHROOM3Q8TF72 1996 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 EEF2KO00418 725 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 TTI1O43156 1089 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 COCHO43405 550 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 HEXIM1O94992 359 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 HNRNPA1P09651 372 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 PECAM1P16284 738 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 HOXC13P31276 330 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 KCNJ1P48048 391 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 VCPP55072 806 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 MRPS25P82663 173 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 BYSLQ13895 437 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 NOMO1Q15155 1222 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms