RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ZDHHC7Q9NXF8 308 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 C1RP00736 705 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 MBL2P11226 248 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 GOT1P17174 413 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 CDC25CP30307 473 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 HOXA9P31269 272 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 PDK2Q15119 407 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 DPYSL2Q16555 572 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 ZDHHC14Q8IZN3 488 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 HDAC7Q8WUI4 952 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 ZNF707Q96C28 371 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 NAP1L3Q99457 506 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 MAK16Q9BXY0 300 aaKnown RBP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 TTC7AQ9ULT0 858 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 V9GYY5 206 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 PAGE1O75459 146 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 APOEP02649 317 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 COPS2P61201 443 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 HYAL1Q12794 435 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 GRIN2CQ14957 1233 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 KCTD19Q17RG1 926 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 BRMS1LQ5PSV4 323 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 RTL10Q7L3V2 364 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 SMG7Q92540 1137 aaKnown RBP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 SLC39A13Q96H72 371 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.96■■□□□ 1.112e-10■□□□□ 11.3
CPNE1-204ENST00000397443 ARHGEF38Q9NXL2 777 aa21.96■■□□□ 1.11
CPNE1-204ENST00000397443 CWC15Q9P013 229 aaKnown RBP21.96■■□□□ 1.11
CPNE1-204ENST00000397443 SCAMP3O14828 347 aaKnown RBP21.95■■□□□ 1.1
CPNE1-204ENST00000397443 HDCP19113 662 aa21.95■■□□□ 1.1
CPNE1-204ENST00000397443 IL4RP24394 825 aa21.95■■□□□ 1.1
CPNE1-204ENST00000397443 TUBP50607 506 aa21.95■■□□□ 1.1
CPNE1-204ENST00000397443 PPP2R5DQ14738 602 aa21.95■■□□□ 1.1
CPNE1-204ENST00000397443 SLC5A9Q2M3M2 681 aa21.95■■□□□ 1.1
CPNE1-204ENST00000397443 KLHL7Q8IXQ5 586 aa21.95■■□□□ 1.1
CPNE1-204ENST00000397443 SHKBP1Q8TBC3 707 aa21.95■■□□□ 1.1
CPNE1-204ENST00000397443 CDCA3Q99618 268 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-204ENST00000397443 OR12D3Q9UGF7 316 aa21.95■■□□□ 1.1
CPNE1-204ENST00000397443 CST8O60676 142 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 CKMP06732 381 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 SRGAP2BP0DMP2 458 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 ARL4AP40617 200 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 MRPS25P82663 173 aaKnown RBP21.94■■□□□ 1.1
CPNE1-204ENST00000397443 SCAPQ12770 1279 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 TEAD2Q15562 447 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 ANKRD20A8PQ5CZ79 823 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 RARS2Q5T160 578 aaKnown RBP21.94■■□□□ 1.1
CPNE1-204ENST00000397443 EP400NLQ6ZTU2 488 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 NOA1Q8NC60 698 aaKnown RBP21.94■■□□□ 1.1
CPNE1-204ENST00000397443 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-204ENST00000397443 C1orf54Q8WWF1 131 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 ING5Q8WYH8 240 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 SLITRK6Q9H5Y7 841 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 SAE1Q9UBE0 346 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-204ENST00000397443 CDH22Q9UJ99 828 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 KCNU1A8MYU2 1149 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 EEF2KO00418 725 aaKnown RBP21.94■■□□□ 1.1
CPNE1-204ENST00000397443 TJP3O95049 919 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 GLP2RO95838 553 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 SLC2A3P11169 496 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 AIF1P55008 147 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 KCNC3Q14003 757 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 PPP2R5EQ16537 467 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 KLHDC10Q6PID8 442 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 PSTKQ8IV42 348 aaKnown RBP21.94■■□□□ 1.1
CPNE1-204ENST00000397443 ZNF276Q8N554 614 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 ATG4AQ8WYN0 398 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 CSPG4P5Q96PW8 444 aa21.94■■□□□ 1.1
CPNE1-204ENST00000397443 SMG9Q9H0W8 520 aaKnown RBP21.94■■□□□ 1.1
CPNE1-204ENST00000397443 R3HDM2Q9Y2K5 976 aaKnown RBP21.94■■□□□ 1.1
CPNE1-204ENST00000397443 DENND4CQ5VZ89 1909 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 C5orf42Q9H799 3197 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 SOX1O00570 391 aaPredicted RBP21.93■■□□□ 1.1
CPNE1-204ENST00000397443 NNTQ13423 1086 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 TEX35Q5T0J7 233 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 GPR158Q5T848 1215 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 PCDH19Q8TAB3 1148 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 RNF157Q96PX1 679 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 ZNF670Q9BS34 389 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 DDX47Q9H0S4 455 aaKnown RBP21.93■■□□□ 1.1
CPNE1-204ENST00000397443 SFXN1Q9H9B4 322 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 HBS1LQ9Y450 684 aaKnown RBP21.93■■□□□ 1.1
CPNE1-204ENST00000397443 NOTCH4Q99466 2003 aa21.93■■□□□ 1.1
CPNE1-204ENST00000397443 GOLGA6L10A0A0M3HER8 536 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 A0A1W2PPC1 479 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 DAPK3O43293 454 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 IGFBP4P22692 258 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 AMPD1P23109 780 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 KPNA1P52294 538 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-204ENST00000397443 KLF1Q13351 362 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-204ENST00000397443 SNX1Q13596 522 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 SIX1Q15475 284 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-204ENST00000397443 MICALL1Q8N3F8 863 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 ATP6V0D2Q8N8Y2 350 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 TSC1Q92574 1164 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 WBP2Q969T9 261 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 KRT12Q99456 494 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 SLC12A6Q9UHW9 1150 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 CPQQ9Y646 472 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms