RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ZRANB2O95218 330 aaKnown RBP eCLIP17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 OAS1P00973 400 aaKnown RBP17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 GABRR2P28476 465 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 PLA2G5P39877 138 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 MTHFRP42898 656 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 EFEMP1Q12805 493 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 NNTQ13423 1086 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 CA9Q16790 459 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 WHAMMP3Q1A5X7 153 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 PABPC1LQ4VXU2 614 aaKnown RBP17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 HECTD3Q5T447 861 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 KLHDC10Q6PID8 442 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 ELMSAN1Q6PJG2 1045 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 SND1Q7KZF4 910 aaKnown RBP eCLIP17.58■□□□□ 0.415e-7■■■□□ 16.2
TSPAN4-205ENST00000397406 ANKS1BQ7Z6G8 1248 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 RCOR2Q8IZ40 523 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 HSPH1Q92598 858 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 NTAN1Q96AB6 310 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 SLC39A13Q96H72 371 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 RBM41Q96IZ5 413 aaKnown RBP17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 NECTIN4Q96NY8 510 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 CORO1BQ9BR76 489 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 PRKD2Q9BZL6 878 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 SFXN1Q9H9B4 322 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 ANLNQ9NQW6 1124 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 TMEM51Q9NW97 253 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 GPATCH2LQ9NWQ4 482 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 HCFC1R1Q9NWW0 138 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 TTC7AQ9ULT0 858 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 AP4E1Q9UPM8 1137 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 TLR6Q9Y2C9 796 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 C2orf78A6NCI8 922 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 COCHO43405 550 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 ASGR2P07307 311 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 PTPN2P17706 415 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 KDELR1P24390 212 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 AIF1P55008 147 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 SCAPQ12770 1279 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 ZC3H12AQ5D1E8 599 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 BRMS1LQ5PSV4 323 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 ATAT1Q5SQI0 421 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 SEL1L2Q5TEA6 688 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 TADA2BQ86TJ2 420 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 PSTKQ8IV42 348 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 FAM71BQ8TC56 605 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 ACTRT1Q8TDG2 376 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 RNF25Q96BH1 459 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 RIPOR3Q96MK2 946 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 ASAH2Q9NR71 780 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 TMPRSS4Q9NRS4 437 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 ARHGEF38Q9NXL2 777 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 SMARCAL1Q9NZC9 954 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 MARCH2Q9P0N8 246 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 DNMT3BQ9UBC3 853 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 RNF14Q9UBS8 474 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 RASAL2Q9UJF2 1139 aa17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 ARIH1Q9Y4X5 557 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-205ENST00000397406 CCDC195A0A1B0GUA6 201 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 LRRD1A4D1F6 860 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 NRG2O14511 850 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 XYLBO75191 536 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 PDGFBP01127 241 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 IGLV3-27P01718 113 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 CD48P09326 243 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 CDC25CP30307 473 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 ADRA1BP35368 520 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 ATP5C1P36542 298 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 COPS2P61201 443 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 PPP2R5DQ14738 602 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 TRIP4Q15650 581 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 DPYSL2Q16555 572 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 TAZQ16635 292 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 ZFYVE27Q5T4F4 411 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 MFSD7Q6UXD7 560 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 SPOCD1Q6ZMY3 1216 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 BMP8AQ7Z5Y6 402 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 FCRL2Q96LA5 508 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 MAGEB5Q9BZ81 275 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 TKTL2Q9H0I9 626 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 WDCPQ9H6R7 721 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 LIMD1Q9UGP4 676 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 DNMT3LQ9UJW3 386 aa17.56■□□□□ 0.4
TSPAN4-205ENST00000397406 KCNU1A8MYU2 1149 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 PGRMC1O00264 195 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 FGF19O95750 216 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 OLFM2O95897 454 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 MYL4P12829 197 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 L1CAMP32004 1257 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 CCR1P32246 355 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 PTPN7P35236 360 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 CCR2P41597 374 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 CDKN2BP42772 138 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 CDH6P55285 790 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 TBX4P57082 545 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 CYP4F8P98187 520 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 PDK2Q15119 407 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 IER5LQ5T953 404 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 ZNF572Q7Z3I7 529 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 MIB1Q86YT6 1006 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms