RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 MED10Q9BTT4 135 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 SEPT10Q9P0V9 454 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 XPOTO43592 962 aaKnown RBP24.54■■□□□ 1.52
PABPN1-202ENST00000397276 C1QAP02745 245 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 ARL4AP40617 200 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 ACADSBP45954 432 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 SYPL2Q5VXT5 272 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 BSPRYQ5W0U4 402 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 ZNF534Q76KX8 674 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 ADAM32Q8TC27 787 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 HSFY1Q96LI6 401 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 RAB3IPQ96QF0 476 aaPredicted RBP24.54■■□□□ 1.52
PABPN1-202ENST00000397276 NUDCD1Q96RS6 583 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 TXLNGQ9NUQ3 528 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 NUMBLQ9Y6R0 609 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 KCNE1P15382 129 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 VAV1P15498 845 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 PNPLA4P41247 253 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 SKIV2L2P42285 1042 aaKnown RBP24.54■■□□□ 1.52
PABPN1-202ENST00000397276 MAP3K7CLP57077 242 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 INHBEP58166 350 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 EFHC1Q5JVL4 640 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 CTU1Q7Z7A3 348 aaKnown RBP24.54■■□□□ 1.52
PABPN1-202ENST00000397276 LRMDAQ9H2I8 198 aa24.54■■□□□ 1.52
PABPN1-202ENST00000397276 A0A0G2JND7 137 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 C17orf102A2RUQ5 167 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 SPAG6O75602 509 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 BGNP21810 368 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 ALDH3A1P30838 453 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 AP1B1Q10567 949 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 MDH1BQ5I0G3 518 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 TTC39BQ5VTQ0 682 aaPredicted RBP24.53■■□□□ 1.52
PABPN1-202ENST00000397276 HFE2Q6ZVN8 426 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 UNC5BQ8IZJ1 945 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 APOPT1Q96IL0 206 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 M0QYT0 321 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 PTGESO14684 152 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 CSH1P0DML2 217 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 CSH2P0DML3 217 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 MORN1Q5T089 497 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 FYB2Q5VWT5 728 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 CASC4Q6P4E1 433 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 SH2D5Q6ZV89 423 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 TP53INP2Q8IXH6 220 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 CCNYQ8ND76 341 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 HTR3CQ8WXA8 447 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 DUSP16Q9BY84 665 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 IQCGQ9H095 443 aaKnown RBP24.53■■□□□ 1.52
PABPN1-202ENST00000397276 AP5M1Q9H0R1 490 aa24.53■■□□□ 1.52
PABPN1-202ENST00000397276 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.52■■□□□ 1.52
PABPN1-202ENST00000397276 XPO1O14980 1071 aaKnown RBP24.52■■□□□ 1.52
PABPN1-202ENST00000397276 MFSD11O43934 449 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 GCATO75600 419 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 APOEP02649 317 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 ZFXP17010 805 aaPredicted RBP24.52■■□□□ 1.52
PABPN1-202ENST00000397276 PTPN1P18031 435 aaKnown RBP24.52■■□□□ 1.52
PABPN1-202ENST00000397276 SLC25A52Q3SY17 297 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 MROH9Q5TGP6 573 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 KIAA0319Q5VV43 1072 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 PAQR9Q6ZVX9 377 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 TFB1MQ8WVM0 346 aaKnown RBP24.52■■□□□ 1.52
PABPN1-202ENST00000397276 SIGLEC10Q96LC7 697 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 VPS11Q9H270 941 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 LRRC4Q9HBW1 653 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 FZD10Q9ULW2 581 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 LRRC42Q9Y546 428 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 COPEO14579 308 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 CCDC15Q0P6D6 951 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 PCBP1Q15365 356 aaKnown RBP eCLIP24.52■■□□□ 1.525e-7■■□□□ 11.4
PABPN1-202ENST00000397276 NLRP9Q7RTR0 991 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 NME8Q8N427 588 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 SRPK1Q96SB4 655 aaKnown RBP24.52■■□□□ 1.52
PABPN1-202ENST00000397276 MECRQ9BV79 373 aa24.52■■□□□ 1.52
PABPN1-202ENST00000397276 NR2C2P49116 596 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 CPT1AP50416 773 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 NEK3P51956 506 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 CRYBB1P53674 252 aaPredicted RBP24.51■■□□□ 1.51
PABPN1-202ENST00000397276 STRADAQ7RTN6 431 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 MTDHQ86UE4 582 aaKnown RBP24.51■■□□□ 1.51
PABPN1-202ENST00000397276 QKIQ96PU8 341 aaKnown RBP eCLIP24.51■■□□□ 1.512e-13■■□□□ 11.4
PABPN1-202ENST00000397276 ARHGEF4Q9NR80 690 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 WFS1O76024 890 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 ETV4P43268 484 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 RPL34P49207 117 aaKnown RBP24.51■■□□□ 1.51
PABPN1-202ENST00000397276 MRPS5P82675 430 aaKnown RBP24.51■■□□□ 1.51
PABPN1-202ENST00000397276 TAF1BQ53T94 588 aaPredicted RBP24.51■■□□□ 1.51
PABPN1-202ENST00000397276 PDCD7Q8N8D1 485 aaKnown RBP24.51■■□□□ 1.51
PABPN1-202ENST00000397276 TSSK1BQ9BXA7 367 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 DENND2DQ9H6A0 471 aaPredicted RBP24.51■■□□□ 1.51
PABPN1-202ENST00000397276 PNPLA8Q9NP80 782 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 CYLDQ9NQC7 956 aa24.51■■□□□ 1.51
PABPN1-202ENST00000397276 UNCXA6NJT0 531 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 HAS3O00219 553 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 KRT37O76014 449 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 SNRPAP09012 282 aaKnown RBP24.5■■□□□ 1.51
PABPN1-202ENST00000397276 CTSHP09668 335 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 NPR3P17342 541 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 SESN3P58005 492 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 SLC18A2Q05940 514 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 XKR4Q5GH76 650 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms