RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ADGRG2Q8IZP9 1017 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 EPB41L1Q9H4G0 881 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 SLC40A1Q9NP59 571 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 BATF3Q9NR55 127 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 APEX2Q9UBZ4 518 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 RPAP1Q9BWH6 1393 aaPredicted RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 PSMD9O00233 223 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 KMOO15229 486 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 GLP2RO95838 553 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 COMTP21964 271 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 SNRNP35Q16560 246 aaKnown RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 PFKFB3Q16875 520 aaPredicted RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 STRIP1Q5VSL9 837 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 CYP2R1Q6VVX0 501 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 BARGINQ6ZT62 677 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 SYTL5Q8TDW5 730 aaPredicted RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 FAM192AQ9GZU8 254 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 RASSF1Q9NS23 344 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 KIAA1257Q9ULG3 409 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 ZNF189O75820 626 aaPredicted RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 LRPAP1P30533 357 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 NPY2RP49146 381 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 BAATQ14032 418 aaPredicted RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 ZNF615Q8N8J6 731 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 OR2L5Q8NG80 312 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 TOP1MTQ969P6 601 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 TMEM159Q96B96 161 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 SMPD4Q9NXE4 827 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMU1-201ENST00000397149 VPS51Q9UID3 782 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 PHTF1Q9UMS5 762 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 CCNA2P20248 432 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 ZNF613Q6PF04 617 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 SKA1Q96BD8 255 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 C1QTNF1Q9BXJ1 281 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 CEP41Q9BYV8 373 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 RSAD1Q9HA92 442 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 AFF2P51816 1311 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 ABHD14A-ACY1A0A1B0GW23 586 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 RLN1P04808 185 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 EPORP19235 508 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 CRATP43155 626 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 IDH2P48735 452 aaKnown RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 PDPK2PQ6A1A2 396 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 ZNF483Q8TF39 744 aaPredicted RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 SGSM3Q96HU1 749 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 FKBP14Q9NWM8 211 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 OPLAHO14841 1288 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 NTRK1P04629 796 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 CYP2A7P20853 494 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 AP5B1Q2VPB7 878 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 MZT2BQ6NZ67 158 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 MCOLN3Q8TDD5 553 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 CSGALNACT1Q8TDX6 532 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 MLPHQ9BV36 600 aaPredicted RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 CRISPLD1Q9H336 500 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 NCKAP1Q9Y2A7 1128 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 ARL5CA6NH57 179 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CCDC154A6NI56 674 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 MTSS1O43312 755 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CIAO1O76071 339 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 IFNGR2P38484 337 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ALDH3A2P51648 485 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 RPS6KA3P51812 740 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CDKL1Q00532 357 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ZC2HC1CQ53FD0 456 aaPredicted RBP12.61□□□□□ -0.39
SMU1-201ENST00000397149 IZUMO2Q6UXV1 221 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 TFAP2DQ7Z6R9 452 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 HIPK1Q86Z02 1210 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 PPIL6Q8IXY8 311 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 SVOPQ8N4V2 548 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 TTC34A8MYJ7 566 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 TMEM114B3SHH9 223 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 F8VZ95 297 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 URODP06132 367 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 UQCRBP14927 111 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 LSP1P33241 339 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 C21orf59P57076 290 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ZNF772Q68DY9 489 aaPredicted RBP12.61□□□□□ -0.39
SMU1-201ENST00000397149 LRRC70Q7Z2Q7 622 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ZC3H7AQ8IWR0 971 aaKnown RBP12.61□□□□□ -0.39
SMU1-201ENST00000397149 XPR1Q9UBH6 696 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 OGDHLQ9ULD0 1010 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 GSTK1Q9Y2Q3 226 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 GIT1Q9Y2X7 761 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 A0A075B6Q4 140 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 RAD51BO15315 384 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 EGFRP00533 1210 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 HLA-DRAP01903 254 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CHRNGP07510 517 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 TYMPP19971 482 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 AQP5P55064 265 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 STILQ15468 1287 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
SMU1-201ENST00000397149 TLR8Q9NR97 1041 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms