RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 LRRIQ3A6PVS8 624 aaPredicted RBP15.69■□□□□ 0.1
SEC13-206ENST00000397102 RRP8O43159 456 aaKnown RBP15.69■□□□□ 0.1
SEC13-206ENST00000397102 STX6O43752 255 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 EXOC3O60645 756 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 JUPP14923 745 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 IL9RQ01113 521 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 AMPD3Q01432 767 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 ZBTB16Q05516 673 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 SGSM1Q2NKQ1 1148 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 KCNT1Q5JUK3 1230 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 CNNM4Q6P4Q7 775 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 ADAT2Q7Z6V5 191 aaKnown RBP15.69■□□□□ 0.1
SEC13-206ENST00000397102 FCRL3Q96P31 734 aaPredicted RBP15.69■□□□□ 0.1
SEC13-206ENST00000397102 CUEDC2Q9H467 287 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 FBRSQ9HAH7 460 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 AGO1Q9UL18 857 aaKnown RBP15.69■□□□□ 0.1
SEC13-206ENST00000397102 RAI2Q9Y5P3 530 aa15.69■□□□□ 0.1
SEC13-206ENST00000397102 A0A1B0GTQ1 180 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 ENC1O14682 589 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 CAPN9O14815 690 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 RFPL3O75679 317 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 FSBPO95073 299 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 HMBSP08397 361 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 C1SP09871 688 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 BCAT1P54687 386 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 SEMG2Q02383 582 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 EHHADHQ08426 723 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 EFEMP1Q12805 493 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 SLC39A14Q15043 492 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 E2F4Q16254 413 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 FAM173BQ6P4H8 233 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 DENND1CQ8IV53 801 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 FAM217AQ8IXS0 508 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 ZNF843Q8N446 348 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 DDI1Q8WTU0 396 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 BAP1Q92560 729 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 TAF4BQ92750 862 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 CYFIP2Q96F07 1278 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 ORAI3Q9BRQ5 295 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 NRSN2Q9GZP1 204 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 TMEM245Q9H330 911 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 SGK2Q9HBY8 427 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 TFIP11Q9UBB9 837 aaKnown RBP15.68■□□□□ 0.1
SEC13-206ENST00000397102 USP3Q9Y6I4 520 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 AK5Q9Y6K8 562 aa15.68■□□□□ 0.1
SEC13-206ENST00000397102 TEX51A0A1B0GUA7 166 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 VILLO15195 856 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 DNTTP04053 509 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 RPN1P04843 607 aaKnown RBP15.67■□□□□ 0.1
SEC13-206ENST00000397102 ASPAP45381 313 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 C21orf59P57076 290 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 RPS14P62263 151 aaKnown RBP15.67■□□□□ 0.1
SEC13-206ENST00000397102 PDE4CQ08493 712 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 INCA1Q0VD86 236 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 RTP5Q14D33 572 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 ZACNQ401N2 412 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 C8orf34Q49A92 452 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 TTC31Q49AM3 519 aaPredicted RBP15.67■□□□□ 0.1
SEC13-206ENST00000397102 FNDC3BQ53EP0 1204 aaKnown RBP15.67■□□□□ 0.1
SEC13-206ENST00000397102 UNC13DQ70J99 1090 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 SNIP1Q8TAD8 396 aaKnown RBP15.67■□□□□ 0.1
SEC13-206ENST00000397102 WFIKKN2Q8TEU8 576 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 TWNKQ96RR1 684 aa15.67■□□□□ 0.1
SEC13-206ENST00000397102 ACE2Q9BYF1 805 aaPredicted RBP15.67■□□□□ 0.1
SEC13-206ENST00000397102 LDOC1O95751 146 aaPredicted RBP15.66■□□□□ 0.1
SEC13-206ENST00000397102 ASS1P00966 412 aaKnown RBP15.66■□□□□ 0.1
SEC13-206ENST00000397102 PDCP20941 246 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 CLDN6P56747 220 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 RACK1P63244 317 aaKnown RBP15.66■□□□□ 0.1
SEC13-206ENST00000397102 KNOP1Q1ED39 458 aaKnown RBP15.66■□□□□ 0.1
SEC13-206ENST00000397102 GPR155Q7Z3F1 870 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 GATAD2AQ86YP4 633 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 ZNF366Q8N895 744 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 CNDP2Q96KP4 475 aaKnown RBP15.66■□□□□ 0.1
SEC13-206ENST00000397102 USP28Q96RU2 1077 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 ELF4Q99607 663 aaPredicted RBP15.66■□□□□ 0.1
SEC13-206ENST00000397102 C7orf25Q9BPX7 421 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 NT5C1AQ9BXI3 368 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 PRSS16Q9NQE7 514 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 STRIP2Q9ULQ0 834 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 PLA2G4CQ9UP65 541 aa15.66■□□□□ 0.1
SEC13-206ENST00000397102 CAPN8A6NHC0 703 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 CBX4O00257 560 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 IGHV4-34P06331 123 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 HOXD9P28356 352 aaPredicted RBP15.65■□□□□ 0.1
SEC13-206ENST00000397102 HLA-FP30511 346 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 ACADVLP49748 655 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 TARDBPQ13148 414 aaKnown RBP eCLIP15.65■□□□□ 0.11e-7■■□□□ 14.1
SEC13-206ENST00000397102 DNAJC3Q13217 504 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 MPPE1Q53F39 396 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 HES3Q5TGS1 186 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 KIAA0895LQ68EN5 471 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 SPOPLQ6IQ16 392 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 FBXL19Q6PCT2 694 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 ARHGAP18Q8N392 663 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 GOLGA5Q8TBA6 731 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 CYB5D2Q8WUJ1 264 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 GOLGA1Q92805 767 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 SKA1Q96BD8 255 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 PLD4Q96BZ4 506 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms