RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 GALNT15Q8N3T1 639 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 GPR152Q8TDT2 470 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 DTNBP1Q96EV8 351 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 OXNAD1Q96HP4 312 aaPredicted RBP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 PAK5Q9P286 719 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 FAM8A1Q9UBU6 413 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 CHD4Q14839 1912 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 TBX10O75333 385 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 SMIM10L2AP0DMW4 78 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 SMIM10L2BP0DMW5 78 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 MX2P20592 715 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 LMO2P25791 158 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 OGDHQ02218 1023 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 CCL14Q16627 93 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 DNAL1Q4LDG9 190 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 SNRNP25Q9BV90 132 aaKnown RBP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 TMEM109Q9BVC6 243 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 CPSF3Q9UKF6 684 aaKnown RBP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 APPL1Q9UKG1 709 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 TNRC6CQ9HCJ0 1690 aaKnown RBP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 RRN3P2A6NIE6 340 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 AIM2O14862 343 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 XPO1O14980 1071 aaKnown RBP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 DGKIO75912 1065 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 BDNFP23560 247 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 PIGZQ86VD9 579 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 SPATA2LQ8IUW3 424 aaPredicted RBP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 PYROXD2Q8N2H3 581 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 FAM81AQ8TBF8 368 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 UPF1Q92900 1129 aaKnown RBP eCLIP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 EPB41L4BQ9H329 900 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 SUDS3Q9H7L9 328 aaPredicted RBP12.55□□□□□ -0.4
ITGA4-203ENST00000397033 SSX2IPQ9Y2D8 614 aa12.55□□□□□ -0.4
ITGA4-203ENST00000397033 hCG_1818297A0A087WSY0 165 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 SIGLEC16A6NMB1 481 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 MT-CO1P00395 513 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 THEM5Q8N1Q8 247 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 STKLD1Q8NE28 680 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 ZNF518BQ9C0D4 1074 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 ST6GALNAC4Q9H4F1 302 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 ASB7Q9H672 318 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 WDCPQ9H6R7 721 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 SAR1AQ9NR31 198 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 HNRNPRO43390 633 aaKnown RBP12.54□□□□□ -0.4
ITGA4-203ENST00000397033 NOL3O60936 208 aaKnown RBP12.54□□□□□ -0.4
ITGA4-203ENST00000397033 GPC4O75487 556 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 WFS1O76024 890 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 EDN1P05305 212 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 GOT1P17174 413 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 GBE1Q04446 702 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 FOXD4Q12950 439 aaPredicted RBP12.54□□□□□ -0.4
ITGA4-203ENST00000397033 MGAT5BQ3V5L5 792 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 RAB6CQ53S08 254 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 ALKBH8Q96BT7 664 aaKnown RBP12.54□□□□□ -0.4
ITGA4-203ENST00000397033 HDAC11Q96DB2 347 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 GCNAQ96QF7 691 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 RAB6CQ9H0N0 254 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 CCDC134Q9H6E4 229 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
ITGA4-203ENST00000397033 A0A1B0GVG6 124 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 TADA2AO75478 443 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 THP07101 528 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 SMPD1P17405 629 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 SLC25A3Q00325 362 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 CDK16Q00536 496 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 MGAT5Q09328 741 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 DPYSL3Q14195 570 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 RPS6KA2Q15349 733 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 SV2CQ496J9 727 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 FASTKD1Q53R41 847 aaKnown RBP12.54□□□□□ -0.4
ITGA4-203ENST00000397033 RIPOR1Q6ZS17 1223 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 PHF13Q86YI8 300 aaPredicted RBP12.54□□□□□ -0.4
ITGA4-203ENST00000397033 VCPIP1Q96JH7 1222 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 ULBP1Q9BZM6 244 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 PCDH9Q9HC56 1237 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 C20orf96Q9NUD7 363 aaPredicted RBP12.54□□□□□ -0.4
ITGA4-203ENST00000397033 SLC39A10Q9ULF5 831 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 COQ4Q9Y3A0 265 aa12.54□□□□□ -0.4
ITGA4-203ENST00000397033 MYO7AQ13402 2215 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 IL1R2P27930 398 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 TSTA3Q13630 321 aaPredicted RBP12.53□□□□□ -0.4
ITGA4-203ENST00000397033 MORF4L2Q15014 288 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 TMPRSS6Q8IU80 811 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 APLFQ8IW19 511 aaPredicted RBP12.53□□□□□ -0.4
ITGA4-203ENST00000397033 ZCCHC9Q8N567 271 aaKnown RBP12.53□□□□□ -0.4
ITGA4-203ENST00000397033 TFB1MQ8WVM0 346 aaKnown RBP12.53□□□□□ -0.4
ITGA4-203ENST00000397033 EPAS1Q99814 870 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 MECRQ9BV79 373 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 NMUR2Q9GZQ4 415 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 PDZD7Q9H5P4 517 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 GTSE1Q9NYZ3 720 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 WDR27A2RRH5 827 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 STIP1P31948 543 aaKnown RBP12.53□□□□□ -0.4
ITGA4-203ENST00000397033 BCAT1P54687 386 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 RTP1P59025 263 aa12.53□□□□□ -0.4
ITGA4-203ENST00000397033 ART3Q13508 389 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms