RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 MGAT1P26572 445 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 YWHAQP27348 245 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 GARSP41250 739 aaKnown RBP15.68■□□□□ 0.1
MCF2L-205ENST00000397017 COG7P83436 770 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 DCLRE1AQ6PJP8 1040 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 LVRNQ6Q4G3 990 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 ECHDC2Q86YB7 292 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 NDUFAF2Q8N183 169 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 PCDH19Q8TAB3 1148 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 CSPG4P5Q96PW8 444 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 FAM111AQ96PZ2 611 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 MUC3BQ9H195 1237 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 CCDC68Q9H2F9 335 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 C12orf65Q9H3J6 166 aaKnown RBP15.68■□□□□ 0.1
MCF2L-205ENST00000397017 UBN1Q9NPG3 1134 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 RBM22Q9NW64 420 aaKnown RBP eCLIP15.68■□□□□ 0.12e-10■■■□□ 16.2
MCF2L-205ENST00000397017 WDR27A2RRH5 827 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 F9P00740 461 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 CYP3A5P20815 502 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 GPR15P49685 360 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 MAXP61244 160 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 CLDN10P78369 228 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 ITPRIPL1Q6GPH6 555 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 LRRC6Q86X45 466 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 MYCBPAPQ8TBZ2 947 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 PEBP4Q96S96 227 aa15.68■□□□□ 0.1
MCF2L-205ENST00000397017 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.68■□□□□ 0.1
MCF2L-205ENST00000397017 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.68■□□□□ 0.1
MCF2L-205ENST00000397017 A0A0U1RQF3 1178 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 RPL9P32969 192 aaKnown RBP15.67■□□□□ 0.1
MCF2L-205ENST00000397017 TBX4P57082 545 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 PRAMEP78395 509 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 RAP1GAP2Q684P5 730 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 SERINC5Q86VE9 423 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 ZDHHC17Q8IUH5 632 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 PPP4R1Q8TF05 950 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 AUTS2Q8WXX7 1259 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 ART4Q93070 314 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 SGF29Q96ES7 293 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 ETNK2Q9NVF9 386 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 RBM47A0AV96 593 aaKnown RBP15.67■□□□□ 0.1
MCF2L-205ENST00000397017 ABLIM1O14639 778 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 F7P08709 466 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-205ENST00000397017 SLC5A3P53794 718 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 HADHBP55084 474 aaKnown RBP15.67■□□□□ 0.1
MCF2L-205ENST00000397017 HDAC4P56524 1084 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 PLD1Q13393 1074 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 CFAP52Q8N1V2 620 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 MCRS1Q96EZ8 462 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 PLCD4Q9BRC7 762 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 OSBPL7Q9BZF2 842 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 EPN3Q9H201 632 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 CRTAC1Q9NQ79 661 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 ABCF3Q9NUQ8 709 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 HCSTQ9UBK5 93 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 A0A1W2PQ45 241 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-205ENST00000397017 A0A1W2PQY0 241 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 UBA6A0AVT1 1052 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-205ENST00000397017 TRIM66O15016 1216 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 PPM1FP49593 454 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-205ENST00000397017 ZNF132P52740 706 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 KBTBD12Q3ZCT8 623 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 AGBL2Q5U5Z8 902 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 POLNQ7Z5Q5 900 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 CCNYL1Q8N7R7 359 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 SLC35F5Q8WV83 523 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 KCTD15Q96SI1 283 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-205ENST00000397017 TMEM51Q9NW97 253 aa15.67■□□□□ 0.1
MCF2L-205ENST00000397017 A0A1W2PQH9 124 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 FAM47DPA6NHR8 397 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 PCK1P35558 622 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 GEMIN4P57678 1058 aaKnown RBP15.66■□□□□ 0.1
MCF2L-205ENST00000397017 ZNF252P-AS1Q0IIN9 211 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 ZDHHC24Q6UX98 284 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 C16orf59Q7L2K0 433 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 ARMC2Q8NEN0 867 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 TBC1D13Q9NVG8 400 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 MARCH2Q9P0N8 246 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 MFSD11O43934 449 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 PPFIA2O75334 1257 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 CTGFP29279 349 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 ADRA1BP35368 520 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 AARSP49588 968 aaKnown RBP eCLIP15.66■□□□□ 0.1
MCF2L-205ENST00000397017 HARS2P49590 506 aaKnown RBP15.66■□□□□ 0.1
MCF2L-205ENST00000397017 TWF1Q12792 350 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 IKBKEQ14164 716 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 PSMD5Q16401 504 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 SLC25A52Q3SY17 297 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 UBAP2Q5T6F2 1119 aaKnown RBP15.66■□□□□ 0.1
MCF2L-205ENST00000397017 TBC1D1Q86TI0 1168 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-205ENST00000397017 RSPH1Q8WYR4 309 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 TRIM56Q9BRZ2 755 aaKnown RBP15.66■□□□□ 0.1
MCF2L-205ENST00000397017 RASSF4Q9H2L5 321 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 CATSPERBQ9H7T0 1116 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 PIDD1Q9HB75 910 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 TMEM59LQ9UK28 342 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 LTBP1Q14766 1721 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 MGEA5O60502 916 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 AVPR1AP37288 418 aa15.66■□□□□ 0.1
MCF2L-205ENST00000397017 TAF10Q12962 218 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms