RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 GTF2A2P52657 109 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 BCAR1P56945 870 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 MPZL3Q6UWV2 235 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 GORASP1Q9BQQ3 440 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 TEX13BQ9BXU2 312 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 TRIM4Q9C037 500 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 PDP2Q9P2J9 529 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 DNAJB4Q9UDY4 337 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 DOCK1Q14185 1865 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 IGKV6-21A0A0C4DH24 114 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 SOWAHBA6NEL2 793 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 BIRC5O15392 142 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 PLIN3O60664 434 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 PIM1P11309 404 aaPredicted RBP14.37□□□□□ -0.11
NUP98-204ENST00000397004 STXBP2Q15833 593 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 ZNF667Q5HYK9 610 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 CES3Q6UWW8 571 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 SATL1Q86VE3 508 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 TTC30AQ86WT1 665 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 NCAPG2Q86XI2 1143 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 TP53INP2Q8IXH6 220 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 C7orf31Q8N865 590 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 ZNF280CQ8ND82 737 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 JDP2Q8WYK2 163 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 CEP41Q9BYV8 373 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 FZD8Q9H461 694 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 CDH22Q9UJ99 828 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 TSPAN16Q9UKR8 245 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 POMPQ9Y244 141 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 PCDHA11Q9Y5I1 949 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 ZBED1O96006 694 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 NDST1P52848 882 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 CDK18Q07002 472 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 USP4Q13107 963 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 GRM2Q14416 872 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 SLC5A9Q2M3M2 681 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 DNAL1Q4LDG9 190 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 PPP6R3Q5H9R7 873 aaPredicted RBP14.37□□□□□ -0.11
NUP98-204ENST00000397004 EFHC1Q5JVL4 640 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 ATF7IP2Q5U623 682 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 OR6B2Q6IFH4 312 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 TIFABQ6ZNK6 161 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 CATSPERGQ6ZRH7 1159 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 PLD6Q8N2A8 252 aaKnown RBP14.37□□□□□ -0.11
NUP98-204ENST00000397004 PYROXD2Q8N2H3 581 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 HEXIM2Q96MH2 286 aaKnown RBP14.37□□□□□ -0.11
NUP98-204ENST00000397004 NLRP4Q96MN2 994 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 RNPEPQ9H4A4 650 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 NGRNQ9NPE2 291 aaKnown RBP14.37□□□□□ -0.11
NUP98-204ENST00000397004 ITGA7Q13683 1181 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 PAOXQ6QHF9 649 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 MCUQ8NE86 351 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 SLC26A7Q8TE54 656 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 PPP1R16BQ96T49 567 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 TMPRSS4Q9NRS4 437 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 UBAP1Q9NZ09 502 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 SMIM18P0DKX4 95 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 VCLP18206 1134 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 ACAP1Q15027 740 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 UGT2A3Q6UWM9 527 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 ADGRG6Q86SQ4 1221 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 SPNS2Q8IVW8 549 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 TNS4Q8IZW8 715 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 ARHGAP24Q8N264 748 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 ACVR1CQ8NER5 493 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 HAPLN3Q96S86 360 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 NRDE2Q9H7Z3 1164 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 HES2Q9Y543 173 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 SCN1AP35498 2009 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 ARHGAP42A6NI28 874 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 APOL1O14791 398 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 MED7O43513 233 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 PRPSAP2O60256 369 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 ALDH1A2O94788 518 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 MBTD1Q05BQ5 628 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 ASPHQ12797 758 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 FAM47CQ5HY64 1035 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 ACAD11Q709F0 780 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 PPP2R3CQ969Q6 453 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 GBP5Q96PP8 586 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 HESX1Q9UBX0 185 aa14.36□□□□□ -0.11
NUP98-204ENST00000397004 SF3B1O75533 1304 aaKnown RBP eCLIP14.36□□□□□ -0.112e-8■■■□□ 18.2
NUP98-204ENST00000397004 MYOCOSA0A1B0GUC4 107 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 KRT38O76015 456 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 MSX2P35548 267 aaPredicted RBP14.35□□□□□ -0.11
NUP98-204ENST00000397004 OAZ1P54368 228 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 HIC1Q14526 733 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 KRT81Q14533 505 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 PPP1R26Q5T8A7 1209 aaPredicted RBP14.35□□□□□ -0.11
NUP98-204ENST00000397004 DLK2Q6UY11 383 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 ARCQ7LC44 396 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 CMC1Q7Z7K0 106 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 RASSF3Q86WH2 238 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 GDPD5Q8WTR4 605 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 PAPSS1O43252 624 aaPredicted RBP14.35□□□□□ -0.11
NUP98-204ENST00000397004 CLCN3P51790 818 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 EFNA5P52803 228 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 INHBCP55103 352 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 TLR1Q15399 786 aa14.35□□□□□ -0.11
NUP98-204ENST00000397004 STILQ15468 1287 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms