RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 KRT78Q8N1N4 520 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 BLOC1S5Q8TDH9 187 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 HTATIP2Q9BUP3 242 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 FICDQ9BVA6 458 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 C2orf49Q9BVC5 232 aaPredicted RBP16.04■□□□□ 0.16
GNE-202ENST00000396594 CYP39A1Q9NYL5 469 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 SNCAIPQ9Y6H5 919 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 PMPCBO75439 489 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 EIF2S1P05198 315 aaKnown RBP16.04■□□□□ 0.16
GNE-202ENST00000396594 RDH11Q8TC12 318 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.04■□□□□ 0.16
GNE-202ENST00000396594 MED1Q15648 1581 aaPredicted RBP16.04■□□□□ 0.16
GNE-202ENST00000396594 PLIN4Q96Q06 1357 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 TBKBP1A7MCY6 615 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 FKBP9O95302 570 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 ZBTB48P10074 688 aaPredicted RBP16.04■□□□□ 0.16
GNE-202ENST00000396594 MZF1P28698 734 aaPredicted RBP16.04■□□□□ 0.16
GNE-202ENST00000396594 CHKAP35790 457 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 NUP107P57740 925 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 RHBDL3P58872 404 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 BTG3Q14201 252 aaPredicted RBP16.04■□□□□ 0.16
GNE-202ENST00000396594 BRMS1LQ5PSV4 323 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 CHADLQ6NUI6 762 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 USP45Q70EL2 814 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 FKBP9P1Q75LS8 142 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 HS6ST3Q8IZP7 471 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 C4orf33Q8N1A6 199 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 COLGALT1Q8NBJ5 622 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 ERP27Q96DN0 273 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 PAFAH2Q99487 392 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 POLR1EQ9GZS1 481 aaKnown RBP16.04■□□□□ 0.16
GNE-202ENST00000396594 TMEM39AQ9NV64 488 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 TAGLN3Q9UI15 199 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 NID2Q14112 1375 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 LTFP02788 710 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 ENO3P13929 434 aaPredicted RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 CHRNB3Q05901 458 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 PRPF39Q86UA1 669 aaKnown RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 PHF13Q86YI8 300 aaPredicted RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 CYP4Z2PQ8N1L4 340 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 KIAA0895Q8NCT3 520 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 HIPK4Q8NE63 616 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 OR56A4Q8NGH8 313 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 WNT8BQ93098 351 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 OSMRQ99650 979 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 IL22Q9GZX6 179 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 GPRC5CQ9NQ84 441 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 CPA4Q9UI42 421 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 EFR3BQ9Y2G0 817 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 AP4S1Q9Y587 144 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 SMIM35A0A1B0GVV1 85 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 B2RBV5 119 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 SERPINA4P29622 427 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 POLE2P56282 527 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 TBX2Q13207 712 aaPredicted RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 XRCC4Q13426 336 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 DMC1Q14565 340 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 E2F4Q16254 413 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 WNK4Q96J92 1243 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 CCDC90BQ9GZT6 254 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 KCTD5Q9NXV2 234 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 SNTG2Q9NY99 539 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 UBA2Q9UBT2 640 aaPredicted RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 SAC3D1A6NKF1 404 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 KIF1CO43896 1103 aaKnown RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 DDHD2O94830 711 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 ALBP02768 609 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 CYP1A2P05177 515 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 MYL4P12829 197 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 CPA3P15088 417 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 CYP3A5P20815 502 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 PTPN7P35236 360 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 ZNF467Q7Z7K2 595 aaPredicted RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 ADGRA1Q86SQ6 560 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 AKAP7Q9P0M2 348 aaPredicted RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 SMTNL2Q2TAL5 461 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 DCLRE1AQ6PJP8 1040 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 PSTKQ8IV42 348 aaKnown RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 NKAPQ8N5F7 415 aaKnown RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 MCOLN3Q8TDD5 553 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 RUVBL2Q9Y230 463 aaKnown RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 COPG1Q9Y678 874 aaKnown RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 NFAT5O94916 1531 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 SKIV2L2P42285 1042 aaKnown RBP16.03■□□□□ 0.16
GNE-202ENST00000396594 MON2Q7Z3U7 1717 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 CSGALNACT1Q8TDX6 532 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 TBL1YQ9BQ87 522 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 ZNF670Q9BS34 389 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 APOL5Q9BWW9 433 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 KLK14Q9P0G3 267 aa16.03■□□□□ 0.16
GNE-202ENST00000396594 EPS8Q12929 822 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 ZFP1Q6P2D0 407 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 BNC2Q6ZN30 1099 aaPredicted RBP16.02■□□□□ 0.16
GNE-202ENST00000396594 TMA16Q96EY4 203 aaKnown RBP16.02■□□□□ 0.16
GNE-202ENST00000396594 PGM2Q96G03 612 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 APOPT1Q96IL0 206 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 ST6GALNAC4Q9H4F1 302 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 SETD4Q9NVD3 440 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 SPASTQ9UBP0 616 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms