RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 C21orf62-AS1Q17RA5 79 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PAGE2BQ5JRK9 111 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 DACT2Q5SW24 774 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PXDC1Q5TGL8 231 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ATG16L1Q676U5 607 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 DENND5BQ6ZUT9 1274 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PLEKHM3Q6ZWE6 761 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 FRA10AC1Q70Z53 315 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ZNF572Q7Z3I7 529 aaPredicted RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 SNX29P2Q8IUI4 249 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 MICU2Q8IYU8 434 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PPM1NQ8N819 430 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 SPERTQ8NA61 448 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 BPIFB6Q8NFQ5 453 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 FAR2Q96K12 515 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 SYBUQ9NX95 663 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ZNF224Q9NZL3 707 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 COL11A2P13942 1736 aaPredicted RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 SCN9AQ15858 1988 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ABCB11O95342 1321 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 KIF13BQ9NQT8 1826 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 CLIC2O15247 247 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 STAT3P40763 770 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 STX3Q13277 289 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 PEX6Q13608 980 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 ZNF267Q14586 743 aaPredicted RBP8.66□□□□□ -1.02
NDE1-202ENST00000396355 ADRM1Q16186 407 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 CHRDL2Q6WN34 429 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 SETD3Q86TU7 594 aaPredicted RBP8.66□□□□□ -1.02
NDE1-202ENST00000396355 SNX32Q86XE0 403 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 CCDC28AQ8IWP9 274 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 SLC35G2Q8TBE7 412 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 PLEKHO2Q8TD55 490 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 TMIGD2Q96BF3 282 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 SP140LQ9H930 580 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 PFASO15067 1338 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 PNMA6FA0A0J9YX94 578 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 HADHAP40939 763 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 CASP2P42575 452 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 RGS19P49795 217 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 ZNF280AP59817 542 aaPredicted RBP8.66□□□□□ -1.02
NDE1-202ENST00000396355 DHX34Q14147 1143 aaKnown RBP8.66□□□□□ -1.02
NDE1-202ENST00000396355 PRPSAP1Q14558 356 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 DEPDC1Q5TB30 811 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 BPHLQ86WA6 291 aaPredicted RBP8.66□□□□□ -1.02
NDE1-202ENST00000396355 PLD3Q8IV08 490 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 CATSPER1Q8NEC5 780 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 SCFD1Q8WVM8 642 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 SEPT8Q92599 483 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 OXNAD1Q96HP4 312 aaPredicted RBP8.66□□□□□ -1.02
NDE1-202ENST00000396355 TDRD1Q9BXT4 1180 aaKnown RBP8.66□□□□□ -1.02
NDE1-202ENST00000396355 MTMR12Q9C0I1 747 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 NMUR2Q9GZQ4 415 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 KCTD10Q9H3F6 313 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 ENTPD7Q9NQZ7 604 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 CPA4Q9UI42 421 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 SERPINB13Q9UIV8 391 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 CPSF3Q9UKF6 684 aaKnown RBP8.66□□□□□ -1.02
NDE1-202ENST00000396355 KLHL20Q9Y2M5 609 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 NR2E1Q9Y466 385 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 FAM155AB1AL88 458 aaPredicted RBP8.66□□□□□ -1.02
NDE1-202ENST00000396355 hCG_1984214I3L0E3 225 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 TNFRSF10AO00220 468 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 GJB6O95452 261 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 HSMCR30P0CW71 290 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 NR2F2P24468 414 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 ARL4CP56559 192 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 OSTNP61366 133 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 CYP4A11Q02928 519 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 PTPN20Q4JDL3 420 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 ARSHQ5FYA8 562 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 ZBTB49Q6ZSB9 765 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 IFNEQ86WN2 208 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 UNC45BQ8IWX7 931 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 CHCHD4Q8N4Q1 142 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 DCUN1D1Q96GG9 259 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 C8orf48Q96LL4 319 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 USP29Q9HBJ7 922 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 IP6K2Q9UHH9 426 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 COL4A3BPQ9Y5P4 624 aa8.66□□□□□ -1.02
NDE1-202ENST00000396355 DDX39AO00148 427 aaKnown RBP8.65□□□□□ -1.02
NDE1-202ENST00000396355 PJA2O43164 708 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 PHF2O75151 1096 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 MED24O75448 989 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 PARNO95453 639 aaKnown RBP8.65□□□□□ -1.02
NDE1-202ENST00000396355 C6orf222P0C671 652 aaPredicted RBP8.65□□□□□ -1.02
NDE1-202ENST00000396355 CETPP11597 493 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 FKBP3Q00688 224 aaKnown RBP8.65□□□□□ -1.02
NDE1-202ENST00000396355 SPIRE1Q08AE8 756 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 E2F2Q14209 437 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 STAT4Q14765 748 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 EML3Q32P44 896 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 SNRNP48Q6IEG0 339 aaKnown RBP8.65□□□□□ -1.02
NDE1-202ENST00000396355 LRRC8EQ6NSJ5 796 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 DPY19L2P1Q6NXN4 242 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 CYP20A1Q6UW02 462 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 CCDC149Q6ZUS6 474 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 PSD4Q8NDX1 1056 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 GRK7Q8WTQ7 553 aa8.65□□□□□ -1.02
NDE1-202ENST00000396355 TLCD1Q96CP7 247 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms