RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 DPYSQ14117 519 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 FAM182AQ5T1J6 154 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 LGSNQ5TDP6 509 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 STEAP4Q687X5 459 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 MRPL10Q7Z7H8 261 aaKnown RBP17.34■□□□□ 0.37
NUP50-202ENST00000396096 FAM35AQ86V20 835 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 PARP9Q8IXQ6 854 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 KLF6Q99612 283 aaPredicted RBP17.34■□□□□ 0.37
NUP50-202ENST00000396096 CNGB3Q9NQW8 809 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 PCDHA11Q9Y5I1 949 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 CXorf49A8MYA2 514 aaPredicted RBP17.33■□□□□ 0.37
NUP50-202ENST00000396096 OPHN1O60890 802 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 IL1BP01584 269 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 FYNP06241 537 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 CCNB1P14635 433 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.37
NUP50-202ENST00000396096 CCNFP41002 786 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 MAP3K7CLP57077 242 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 DEUP1Q05D60 604 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 MGAT3Q09327 533 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 PDK1Q15118 436 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 NBPF20Q3BBV1 942 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 SPDYAQ5MJ70 313 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 SYPL2Q5VXT5 272 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 SERINC5Q86VE9 423 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 PPM1NQ8N819 430 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 MTBPQ96DY7 904 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 PGAP3Q96FM1 320 aaPredicted RBP17.33■□□□□ 0.37
NUP50-202ENST00000396096 GAD1Q99259 594 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 SMOQ99835 787 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 ZFYVE28Q9HCC9 887 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 SMYD2Q9NRG4 433 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 CDH9Q9ULB4 789 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 RAD54BQ9Y620 910 aa17.33■□□□□ 0.37
NUP50-202ENST00000396096 TRIM49D1C9J1S8 452 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 NRP1O14786 923 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 DCTN3O75935 186 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 STK10O94804 968 aaKnown RBP17.33■□□□□ 0.36
NUP50-202ENST00000396096 CHRNA1P02708 482 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 PYGBP11216 843 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 CYBAP13498 195 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 ALDH3A1P30838 453 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 GNASQ5JWF2 1037 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 GDF6Q6KF10 455 aaPredicted RBP17.33■□□□□ 0.36
NUP50-202ENST00000396096 HFE2Q6ZVN8 426 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 ASRGL1Q7L266 308 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 CTAGE3PQ8IX95 158 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 ZMIZ2Q8NF64 920 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 FERMT1Q9BQL6 677 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 ULBP1Q9BZM6 244 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 MANSC1Q9H8J5 431 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 PIGVQ9NUD9 493 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 MIOSQ9NXC5 875 aa17.33■□□□□ 0.36
NUP50-202ENST00000396096 DCLK1O15075 740 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 AP1G2O75843 785 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 NQO1P15559 274 aaKnown RBP17.32■□□□□ 0.36
NUP50-202ENST00000396096 ADRA1BP35368 520 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 HCAR3P49019 387 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 CLCNKBP51801 687 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 SEMA3BQ13214 749 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 RIPK1Q13546 671 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 SETDB1Q15047 1291 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 LRRC8BQ6P9F7 803 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 DENND5BQ6ZUT9 1274 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 RFX8Q6ZV50 586 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 MAGEC3Q8TD91 643 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 LGMNQ99538 433 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 WDR6Q9NNW5 1121 aaKnown RBP17.32■□□□□ 0.36
NUP50-202ENST00000396096 ARHGEF3Q9NR81 526 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 RRN3Q9NYV6 651 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 MOCS1Q9NZB8 636 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 CHKBQ9Y259 395 aa17.32■□□□□ 0.36
NUP50-202ENST00000396096 ARL5CA6NH57 179 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 HHLA1C9JL84 531 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 RNF103O00237 685 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 PPP1R12AO14974 1030 aaPredicted RBP17.31■□□□□ 0.36
NUP50-202ENST00000396096 ATP5HO75947 161 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 KRT38O76015 456 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 ALDH1A2O94788 518 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 SERPINB9P50453 376 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 SNCBQ16143 134 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 FYB2Q5VWT5 728 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 RGMBQ6NW40 437 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 AGMOQ6ZNB7 445 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 MPP5Q8N3R9 675 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 COLGALT1Q8NBJ5 622 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 P2RY11Q96G91 374 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 PCED1BQ96HM7 432 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 TMPRSS4Q9NRS4 437 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 MYBPHLA2RUH7 354 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 YJEFN3A6XGL0 299 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 E7ENQ6 273 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 EEF2KO00418 725 aaKnown RBP17.31■□□□□ 0.36
NUP50-202ENST00000396096 C2CD2LO14523 706 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 KLF11O14901 512 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 GPR182O15218 404 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 RFPL1O75677 317 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 UNC5CO95185 931 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 CSH1P0DML2 217 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 CSH2P0DML3 217 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms