RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 ADIPOR2Q86V24 386 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 DEFB119Q8N690 84 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.87■□□□□ 0.29
CXCL12-206ENST00000395795 PIGKQ92643 395 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 SPACA7Q96KW9 195 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 FCRL2Q96LA5 508 aaPredicted RBP16.87■□□□□ 0.29
CXCL12-206ENST00000395795 CRACR2AQ9BSW2 395 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 SLC2A11Q9BYW1 496 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 SIX2Q9NPC8 291 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 ELOVL2Q9NXB9 296 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 TJP2Q9UDY2 1190 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 PCDH15Q96QU1 1955 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 GOLGA6L7A0A1B0GV03 622 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 TSPAN3O60637 253 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 LTFP02788 710 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 PRKCHP24723 683 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 PI4KAP42356 2102 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 COPAP53621 1224 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 EIF4EBP2Q13542 120 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-206ENST00000395795 ZNF234Q14588 700 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 MEA1Q16626 185 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 ADGRF1Q5T601 910 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 ANKS1BQ7Z6G8 1248 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 SYT12Q8IV01 421 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 PGBD3Q8N328 593 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 WDTC1Q8N5D0 677 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 DQX1Q8TE96 717 aaKnown RBP16.86■□□□□ 0.29
CXCL12-206ENST00000395795 RNF139Q8WU17 664 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 ZNF606Q8WXB4 792 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 SLC39A13Q96H72 371 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 UBE2TQ9NPD8 197 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-206ENST00000395795 USP36Q9P275 1121 aaKnown RBP16.86■□□□□ 0.29
CXCL12-206ENST00000395795 CYP8B1Q9UNU6 501 aa16.86■□□□□ 0.29
CXCL12-206ENST00000395795 ATXN2Q99700 1313 aaKnown RBP16.86■□□□□ 0.29
CXCL12-206ENST00000395795 ASCC3Q8N3C0 2202 aaKnown RBP16.85■□□□□ 0.29
CXCL12-206ENST00000395795 KCNJ18B7U540 433 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 KHNYNO15037 678 aaKnown RBP16.85■□□□□ 0.29
CXCL12-206ENST00000395795 PAPSS1O43252 624 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-206ENST00000395795 NCAM1P13591 858 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 HARS2P49590 506 aaKnown RBP16.85■□□□□ 0.29
CXCL12-206ENST00000395795 RING1Q06587 406 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 CETN1Q12798 172 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 BYSLQ13895 437 aaKnown RBP16.85■□□□□ 0.29
CXCL12-206ENST00000395795 PTPRNQ16849 979 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 MPPE1Q53F39 396 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 N4BP2L1Q5TBK1 243 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-206ENST00000395795 PIK3R6Q5UE93 754 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 SYPL2Q5VXT5 272 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 IL31Q6EBC2 164 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 RFWD3Q6PCD5 774 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 SLC23A3Q6PIS1 610 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 TMEM110Q86TL2 294 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 METTL3Q86U44 580 aaKnown RBP16.85■□□□□ 0.29
CXCL12-206ENST00000395795 SCUBE3Q8IX30 993 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 DDI1Q8WTU0 396 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 STK32AQ8WU08 396 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 ZNF419Q96HQ0 510 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-206ENST00000395795 PRICKLE1Q96MT3 831 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-206ENST00000395795 MIS12Q9H081 205 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 TMEM245Q9H330 911 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 CAPN10Q9HC96 672 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 CHMP5Q9NZZ3 219 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 NAALADL1Q9UQQ1 740 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 CEP192Q8TEP8 1941 aa16.85■□□□□ 0.29
CXCL12-206ENST00000395795 GIPC1O14908 333 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 MAP3K13O43283 966 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 FBXO21O94952 628 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 KCNK5O95279 499 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 IGLV3-25P01717 112 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 PON1P27169 355 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 PMLP29590 882 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 PITX1P78337 314 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-206ENST00000395795 RPL6Q02878 288 aaKnown RBP16.84■□□□□ 0.29
CXCL12-206ENST00000395795 EIF4HQ15056 248 aaKnown RBP16.84■□□□□ 0.29
CXCL12-206ENST00000395795 TRIM61Q5EBN2 209 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 LYSMD4Q5XG99 296 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 BEND5Q7L4P6 421 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 SHC3Q92529 594 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 AZIN2Q96A70 460 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 TMA16Q96EY4 203 aaKnown RBP16.84■□□□□ 0.29
CXCL12-206ENST00000395795 CNTNAP3BQ96NU0 1288 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 CNTNAP3Q9BZ76 1288 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 CLSTN2Q9H4D0 955 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 FSCN3Q9NQT6 498 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 XPO7Q9UIA9 1087 aaKnown RBP16.84■□□□□ 0.29
CXCL12-206ENST00000395795 ACACBO00763 2458 aa16.84■□□□□ 0.29
CXCL12-206ENST00000395795 NPC1O15118 1278 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 ACSL4O60488 711 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 ZNF217O75362 1048 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 IGLV3-19P01714 112 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 CYBBP04839 570 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 KRT5P13647 590 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 ZNF33AQ06730 810 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 TAF5Q15542 800 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 DPCR1Q3MIW9 517 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 MIIPQ5JXC2 388 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 SDE2Q6IQ49 451 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 SLC36A4Q6YBV0 504 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 TAC4Q86UU9 113 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 DDX1Q92499 740 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms