RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 TMEM117Q9H0C3 514 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 ZBP1Q9H171 429 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 NELFAQ9H3P2 528 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 HEBP1Q9NRV9 189 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 SMC4Q9NTJ3 1288 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 SETD4Q9NVD3 440 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 SAMD15Q9P1V8 674 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 CLIP2Q9UDT6 1046 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 CDH7Q9ULB5 785 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 PADI3Q9ULW8 664 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 HDAC5Q9UQL6 1122 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 APOBEC2Q9Y235 224 aaKnown RBP6.08□□□□□ -1.44
AP3S1-202ENST00000395548 PCNX2A6NKB5 2137 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 POLQO75417 2590 aa6.08□□□□□ -1.44
AP3S1-202ENST00000395548 FRMPD4Q14CM0 1322 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 SETD2Q9BYW2 2564 aaPredicted RBP6.07□□□□□ -1.44
AP3S1-202ENST00000395548 DENND3A2RUS2 1198 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 E9PAM4 449 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 CCER2I3L3R5 266 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 M0R2C6 588 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 MATN2O00339 956 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 ACO1P21399 889 aaKnown RBP6.07□□□□□ -1.44
AP3S1-202ENST00000395548 ITPKBP27987 946 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 FLT3P36888 993 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 TRAPPC10P48553 1259 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 ALDH6A1Q02252 535 aaKnown RBP6.07□□□□□ -1.44
AP3S1-202ENST00000395548 TFCP2Q12800 502 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 SEMA3BQ13214 749 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 MTMR1Q13613 665 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 KARSQ15046 597 aaKnown RBP6.07□□□□□ -1.44
AP3S1-202ENST00000395548 PLK5Q496M5 336 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 KCNV1Q6PIU1 500 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 C1orf228Q6PIY5 440 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 PCSK4Q6UW60 755 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 SLC24A5Q71RS6 500 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 CHST14Q8NCH0 376 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 FAM3CQ92520 227 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 CHMP4CQ96CF2 233 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 FOXB1Q99853 325 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 PI4K2AQ9BTU6 479 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 TARS2Q9BW92 718 aaKnown RBP6.07□□□□□ -1.44
AP3S1-202ENST00000395548 NUSAP1Q9BXS6 441 aaKnown RBP6.07□□□□□ -1.44
AP3S1-202ENST00000395548 ELAC1Q9H777 363 aaKnown RBP6.07□□□□□ -1.44
AP3S1-202ENST00000395548 AGO3Q9H9G7 860 aaKnown RBP6.07□□□□□ -1.44
AP3S1-202ENST00000395548 ACSS2Q9NR19 701 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 MAN1C1Q9NR34 630 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 TMEM161AQ9NX61 479 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 ZNF180Q9UJW8 692 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 ZNF215Q9UL58 517 aaPredicted RBP6.07□□□□□ -1.44
AP3S1-202ENST00000395548 VWA7Q9Y334 891 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 CDY2AQ9Y6F7 541 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 MGAQ8IWI9 3026 aa6.07□□□□□ -1.44
AP3S1-202ENST00000395548 ZMYM2Q9UBW7 1377 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 PMS2P1A4D2B8 440 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 CYR61O00622 381 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 ZNF500O60304 480 aaPredicted RBP6.06□□□□□ -1.44
AP3S1-202ENST00000395548 OPA1O60313 960 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 MECP2P51608 486 aaKnown RBP6.06□□□□□ -1.44
AP3S1-202ENST00000395548 KIF11P52732 1056 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 SESN2P58004 480 aaPredicted RBP6.06□□□□□ -1.44
AP3S1-202ENST00000395548 RPS6P62753 249 aaKnown RBP6.06□□□□□ -1.44
AP3S1-202ENST00000395548 MRPS6P82932 125 aaKnown RBP6.06□□□□□ -1.44
AP3S1-202ENST00000395548 RNF219Q5W0B1 726 aaPredicted RBP6.06□□□□□ -1.44
AP3S1-202ENST00000395548 ZNF280DQ6N043 979 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 SLC30A10Q6XR72 485 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 SMAP1Q8IYB5 467 aaPredicted RBP6.06□□□□□ -1.44
AP3S1-202ENST00000395548 HDAC7Q8WUI4 952 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 AUTS2Q8WXX7 1259 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 CFHR4Q92496 578 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 LPPQ93052 612 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 IWS1Q96ST2 819 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 RIOK1Q9BRS2 568 aaKnown RBP6.06□□□□□ -1.44
AP3S1-202ENST00000395548 USP25Q9UHP3 1055 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 TAGLN3Q9UI15 199 aa6.06□□□□□ -1.44
AP3S1-202ENST00000395548 ZFHX3Q15911 3703 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 FLNCQ14315 2725 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 NF1P21359 2839 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 SPAG17Q6Q759 2223 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 TSC2P49815 1807 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 TRABD2BA6NFA1 517 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 CYP17A1P05093 508 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 CYP2D6P10635 497 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 CHRNB1P11230 501 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 PBX3P40426 434 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 EIF2S3P41091 472 aaKnown RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 STAT5BP51692 787 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 ATXN3P54252 364 aaPredicted RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 ROM1Q03395 351 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 STRN3Q13033 797 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 DUSP8Q13202 625 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 TRIP6Q15654 476 aaKnown RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 ZNF174Q15697 407 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 HSDL1Q3SXM5 330 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 NRN1LQ496H8 165 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 CELF3Q5SZQ8 465 aaKnown RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 L1TD1Q5T7N2 865 aaKnown RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 Q6ZSN1 163 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 UBE2R2Q712K3 238 aaPredicted RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 STRA8Q7Z7C7 330 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 C11orf74Q86VG3 221 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms