RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 VSTM1Q6UX27 236 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 CREG2Q8IUH2 290 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 SVOPQ8N4V2 548 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 JOSD2Q8TAC2 188 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 C2orf15Q8WU43 125 aaKnown RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 PIWIL1Q96J94 861 aaKnown RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 RHOBTB2Q9BYZ6 727 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 MTIF3Q9H2K0 278 aaKnown RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 LRRC4Q9HBW1 653 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 CNGB3Q9NQW8 809 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 ENAMQ9NRM1 1142 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 PCDHB12Q9Y5F1 795 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 CCDC66A2RUB6 948 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 H3BRJ5 948 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 FBXO21O94952 628 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 GLI1P08151 1106 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 LCP1P13796 627 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 CTNNA1P35221 906 aaKnown RBP11.92□□□□□ -0.5
RTN1-203ENST00000395090 MRPS5P82675 430 aaKnown RBP11.92□□□□□ -0.5
RTN1-203ENST00000395090 ADIGQ0VDE8 80 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 EFHC1Q5JVL4 640 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 ZNF385CQ66K41 422 aaPredicted RBP11.92□□□□□ -0.5
RTN1-203ENST00000395090 TRNP1Q6NT89 227 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 PRSS55Q6UWB4 352 aaPredicted RBP11.92□□□□□ -0.5
RTN1-203ENST00000395090 CPNE8Q86YQ8 564 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 WFDC8Q8IUA0 241 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.92□□□□□ -0.5
RTN1-203ENST00000395090 COG1Q8WTW3 980 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 RIN2Q8WYP3 895 aaPredicted RBP11.92□□□□□ -0.5
RTN1-203ENST00000395090 PBKQ96KB5 322 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 C8orf48Q96LL4 319 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 NECAB3Q96P71 396 aaPredicted RBP11.92□□□□□ -0.5
RTN1-203ENST00000395090 HERC2P3Q9BVR0 1158 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 ASNSD1Q9NWL6 643 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 RNF14Q9UBS8 474 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 PCDHB5Q9Y5E4 795 aa11.92□□□□□ -0.5
RTN1-203ENST00000395090 TMEM110-MUSTN1A8MSY1 372 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 F8VP50 259 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 VNN2O95498 520 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 B3GALT4O96024 378 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 ESRRAP11474 423 aaPredicted RBP11.91□□□□□ -0.5
RTN1-203ENST00000395090 PDGFRAP16234 1089 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 NDUFV1P49821 464 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 TKTL1P51854 596 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 CDR1P51861 262 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 KRT17Q04695 432 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 PSMD5Q16401 504 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 ZNF423Q2M1K9 1284 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 LRRC38Q5VT99 294 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 KIAA1841Q6NSI8 718 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 GPRIN1Q7Z2K8 1008 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 ARFGAP1Q8N6T3 406 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 SPPL2BQ8TCT7 592 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 CLEC4CQ8WTT0 213 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 ALG3Q92685 438 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 CLSTN3Q9BQT9 956 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 C11orf84Q9BUA3 381 aaPredicted RBP11.91□□□□□ -0.5
RTN1-203ENST00000395090 CARD9Q9H257 536 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 IL37Q9NZH6 218 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 HSFX1Q9UBD0 423 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 TTC7AQ9ULT0 858 aaPredicted RBP11.91□□□□□ -0.5
RTN1-203ENST00000395090 NR2E3Q9Y5X4 410 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 CDY1Q9Y6F8 540 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 NLRC5Q86WI3 1866 aa11.91□□□□□ -0.5
RTN1-203ENST00000395090 MTMR11A4FU01 709 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 CCDC85CA6NKD9 419 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 KCNK3O14649 394 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 ZNF185O15231 689 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 ADAM12O43184 909 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 SART1O43290 800 aaKnown RBP11.9□□□□□ -0.5
RTN1-203ENST00000395090 SPOPO43791 374 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 FGF18O76093 207 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 ABLIM3O94929 683 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 GPD1P21695 349 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 CXCR5P32302 372 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 FLT3P36888 993 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 BMPR1AP36894 532 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 GRIK1P39086 918 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 GLUD2P49448 558 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 YWHAZP63104 245 aaKnown RBP11.9□□□□□ -0.5
RTN1-203ENST00000395090 CCDC14Q49A88 953 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 CC2D1AQ6P1N0 951 aaPredicted RBP11.9□□□□□ -0.5
RTN1-203ENST00000395090 BHLHA9Q7RTU4 235 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 ZNF572Q7Z3I7 529 aaPredicted RBP11.9□□□□□ -0.5
RTN1-203ENST00000395090 VPS52Q8N1B4 723 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 SIX6OS1Q8N1H7 587 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 EMC1Q8N766 993 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 UBL4BQ8N7F7 174 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 ATAD1Q8NBU5 361 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 ZNF461Q8TAF7 563 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 RXFP2Q8WXD0 754 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 IRGQQ8WZA9 623 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 CENPIQ92674 756 aaPredicted RBP11.9□□□□□ -0.5
RTN1-203ENST00000395090 KRT35Q92764 455 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 NT5C3BQ969T7 300 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 CNPY3Q9BT09 278 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 PTPRDP23468 1912 aa11.9□□□□□ -0.5
RTN1-203ENST00000395090 PSTPIP1O43586 416 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 HSF2BPO75031 334 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 GRAP2O75791 330 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms