RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 KCNV2Q8TDN2 545 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 CFAP36Q96G28 342 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 SERAC1Q96JX3 654 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 PITPNM3Q9BZ71 974 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 YIPF3Q9GZM5 350 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 SLC38A7Q9NVC3 462 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 CXorf49A8MYA2 514 aaPredicted RBP14.42□□□□□ -0.1
SNCA-204ENST00000394989 M0QYT0 321 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 FAM155BO75949 473 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 SUN1O94901 812 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 FAM163BP0C2L3 166 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 SLC8A3P57103 927 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 SARNPP82979 210 aaKnown RBP14.42□□□□□ -0.1
SNCA-204ENST00000394989 LVRNQ6Q4G3 990 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 MPP5Q8N3R9 675 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 RNF217Q8TC41 542 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 MED10Q9BTT4 135 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 LRRC4Q9HBW1 653 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 CASTOR2A6NHX0 329 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 YJEFN3A6XGL0 299 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 E7ENQ6 273 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 PPP1R12AO14974 1030 aaPredicted RBP14.42□□□□□ -0.1
SNCA-204ENST00000394989 MGEA5O60502 916 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 KPNA6O60684 536 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 FAM200BP0CF97 657 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 ADRA1DP25100 572 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 NME3Q13232 169 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 PTK7Q13308 1070 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 VPS52Q8N1B4 723 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 SIX6OS1Q8N1H7 587 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 FITM2Q8N6M3 262 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 ANKLE1Q8NAG6 615 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 MCUQ8NE86 351 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 TCP10LQ8TDR4 215 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 RNF139Q8WU17 664 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 SYT15Q9BQS2 421 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 RHOBTB2Q9BYZ6 727 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 FRMD8Q9BZ67 464 aaPredicted RBP14.42□□□□□ -0.1
SNCA-204ENST00000394989 DNAI2Q9GZS0 605 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 SMYD2Q9NRG4 433 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 SLC17A7Q9P2U7 560 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 ZC3H7BQ9UGR2 993 aaKnown RBP14.42□□□□□ -0.1
SNCA-204ENST00000394989 ARL2BPQ9Y2Y0 163 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 DIAPH2O60879 1101 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 CAPN15O75808 1086 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 UBOX5O94941 541 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 ATP6V1G2O95670 118 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 ARL4AP40617 200 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 ELF3P78545 371 aaPredicted RBP14.42□□□□□ -0.1
SNCA-204ENST00000394989 FAAP100Q0VG06 881 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 UPP1Q16831 310 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 HEATR6Q6AI08 1181 aaKnown RBP14.42□□□□□ -0.1
SNCA-204ENST00000394989 FAM35AQ86V20 835 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 TP53INP2Q8IXH6 220 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 CCDC63Q8NA47 563 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 ADAM32Q8TC27 787 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 HTR3CQ8WXA8 447 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 SIGLEC10Q96LC7 697 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 ULBP1Q9BZM6 244 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 UPF3AQ9H1J1 476 aaKnown RBP14.42□□□□□ -0.1
SNCA-204ENST00000394989 CHST12Q9NRB3 414 aa14.42□□□□□ -0.1
SNCA-204ENST00000394989 RCOR3Q9P2K3 495 aaPredicted RBP14.42□□□□□ -0.1
SNCA-204ENST00000394989 A8MUI8 341 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 FAM72CH0Y354 149 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 SPAG6O75602 509 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 ZWINTO95229 277 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 ANP32DO95626 131 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 CAP1Q01518 475 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 GALNTL6Q49A17 601 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 FAM72AQ5TYM5 149 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 FAM72DQ6L9T8 149 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 FAM72BQ86X60 149 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 PSTKQ8IV42 348 aaKnown RBP14.41□□□□□ -0.1
SNCA-204ENST00000394989 TFB1MQ8WVM0 346 aaKnown RBP14.41□□□□□ -0.1
SNCA-204ENST00000394989 RTP3Q9BQQ7 232 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 PHTF1Q9UMS5 762 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 F5H423 210 aaPredicted RBP14.41□□□□□ -0.1
SNCA-204ENST00000394989 I3L4J1 428 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 AP1G2O75843 785 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 TPSB2P20231 275 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 INHBEP58166 350 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 DAOAP59103 153 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 SEMA5AQ13591 1074 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 TPSAB1Q15661 275 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 TIGD5Q53EQ6 642 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 RAB41Q5JT25 222 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 UNC5AQ6ZN44 842 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 BHLHA9Q7RTU4 235 aa14.41□□□□□ -0.1
SNCA-204ENST00000394989 WDR6Q9NNW5 1121 aaKnown RBP14.41□□□□□ -0.1
SNCA-204ENST00000394989 HHLA1C9JL84 531 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 CREB3O43889 395 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 ADAMTS4O75173 837 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 DNAJC8O75937 253 aaPredicted RBP14.4□□□□□ -0.1
SNCA-204ENST00000394989 TOMM70O94826 608 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 PRKCHP24723 683 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 LHX1P48742 406 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 CRYMQ14894 314 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 ANKRD20A2Q5SQ80 823 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 ANKRD20A1Q5TYW2 823 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 ANKRD20A3Q5VUR7 823 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms