RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CSDE1O75534 798 aaKnown RBP18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 GSRP00390 522 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 P4HA1P13674 534 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 SERPINB9P50453 376 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 CACNA2D1P54289 1103 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 IRX4P78413 519 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 EFCAB12Q6NXP0 572 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 OLFML1Q6UWY5 402 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 PLPPR4Q7Z2D5 763 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 C12orf29Q8N999 325 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 DEPDC1BQ8WUY9 529 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 KHSRPQ92945 711 aaKnown RBP eCLIP18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 ZNF778Q96MU6 729 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 NRDE2Q9H7Z3 1164 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 PDGFCQ9NRA1 345 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 CITO14578 2027 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 MAGEA13PA6NCF6 341 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 MANSC4A6NHS7 340 aaPredicted RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 ATP5BP06576 529 aaKnown RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 GNAT1P11488 350 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 TPSB2P20231 275 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 TAF1CQ15572 869 aaPredicted RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 TPSAB1Q15661 275 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 GOLGA7BQ2TAP0 167 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 ZNF792Q3KQV3 632 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 PPP6R3Q5H9R7 873 aaPredicted RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 TIFABQ6ZNK6 161 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 ARCQ7LC44 396 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 CDKL3Q8IVW4 592 aaPredicted RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 ZNF670Q9BS34 389 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 XAB2Q9HCS7 855 aaKnown RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 THAP1Q9NVV9 213 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 DDX43Q9NXZ2 648 aaKnown RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 MEI4A8MW99 385 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 NOP56O00567 594 aaKnown RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 GCATO75600 419 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 CYP2F1P24903 491 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 CPOXP36551 454 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 GBE1Q04446 702 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 SLC10A2Q12908 348 aaPredicted RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 TUBB3Q13509 450 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 SLC10A6Q3KNW5 377 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 FASTKD1Q53R41 847 aaKnown RBP18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 C6orf163Q5TEZ5 329 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 FOXB2Q5VYV0 432 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 PMF1Q6P1K2 205 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 C16orf46Q6P387 395 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 C4orf22Q6V702 233 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 ARMCX2Q7L311 632 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 IFNL1Q8IU54 200 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 CCDC33Q8N5R6 958 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 SHKBP1Q8TBC3 707 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 TBCBQ99426 244 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 MIS12Q9H081 205 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 C1orf21Q9H246 121 aa18.93■□□□□ 0.62
PCDHA1-202ENST00000394633 MDM4O15151 490 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 ITM2AO43736 263 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 LYPLA1O75608 230 aaPredicted RBP18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 SDC4P31431 198 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 CELF3Q5SZQ8 465 aaKnown RBP18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 C1orf146Q5VVC0 180 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 SLC30A9Q6PML9 568 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 UNC5BQ8IZJ1 945 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 PPP1R12CQ9BZL4 782 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 MOCS1Q9NZB8 636 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 EMCNQ9ULC0 261 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 C2CD2Q9Y426 696 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 MYO18AQ92614 2054 aaKnown RBP18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 C6orf222P0C671 652 aaPredicted RBP18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 TFE3P19532 575 aaPredicted RBP18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 AOC1P19801 751 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 HDAC4P56524 1084 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 AP2B1P63010 937 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 NBPF20Q3BBV1 942 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 C11orf91Q3C1V1 193 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 MBLAC2Q68D91 279 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 KYAT3Q6YP21 454 aaKnown RBP18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 SLC25A41Q8N5S1 370 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 COPS5Q92905 334 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 CPB2Q96IY4 423 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 APOL6Q9BWW8 343 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 MAGEB5Q9BZ81 275 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 IFT122Q9HBG6 1241 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 GPAMQ9HCL2 828 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 PRMT7Q9NVM4 692 aaPredicted RBP18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 SLC17A6Q9P2U8 582 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 PPM1HQ9ULR3 514 aa18.92■□□□□ 0.62
PCDHA1-202ENST00000394633 SCN1AP35498 2009 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 A0A088AWK7 358 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 CLGNO14967 610 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 USP1O94782 785 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 MCF2P10911 925 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 FGF3P11487 239 aaPredicted RBP18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 RPL10AP62906 217 aaKnown RBP18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 SLC6A3Q01959 620 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 GRB14Q14449 540 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 TMEM132DQ14C87 1099 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 GSTA3Q16772 222 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 PPP1R26Q5T8A7 1209 aaPredicted RBP18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 TEDDM1Q5T9Z0 273 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms