RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 FAM131BQ86XD5 332 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 MICAL1Q8TDZ2 1067 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 IQCGQ9H095 443 aaKnown RBP13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 WASF2Q9Y6W5 498 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 MEI4A8MW99 385 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 SPTLC1O15269 473 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 ITM2AO43736 263 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 PRKCHP24723 683 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 KDSRQ06136 332 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 UBAP2LQ14157 1087 aaKnown RBP13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 KYAT1Q16773 422 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 CTU1Q7Z7A3 348 aaKnown RBP13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 RTP4Q96DX8 246 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 SLC4A5Q9BY07 1137 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 TRIM6Q9C030 488 aaPredicted RBP13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 KLC2Q9H0B6 622 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 SAR1AQ9NR31 198 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 PPARGC1AQ9UBK2 798 aaKnown RBP13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 MAGED2Q9UNF1 606 aaPredicted RBP13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 H3BRJ5 948 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 ESRRAP11474 423 aaPredicted RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 ABCG1P45844 678 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 ALDH18A1P54886 795 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 AQP5P55064 265 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 SESN2P58004 480 aaPredicted RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 DCAF4L1Q3SXM0 396 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 TEX44Q53QW1 395 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 ZNF778Q96MU6 729 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 TBCBQ99426 244 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 SLC24A3Q9HC58 644 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 ACSS2Q9NR19 701 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 DTLQ9NZJ0 730 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 PIN4Q9Y237 131 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 TRPM7Q96QT4 1865 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 BCLAF3A2AJT9 711 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 RECQL4O94761 1208 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 AMHP03971 560 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 DARSP14868 501 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 PSEN2P49810 448 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 PGGT1BP53609 377 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 CRYMQ14894 314 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 BOLA3Q53S33 107 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 PPM1JQ5JR12 505 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 ANO7Q6IWH7 933 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 CASC4Q6P4E1 433 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 RPAINQ86UA6 219 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 MAP7D3Q8IWC1 876 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 E2F7Q96AV8 911 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 MOCOSQ96EN8 888 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 SNX27Q96L92 541 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 CSPG4P5Q96PW8 444 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 PNPLA8Q9NP80 782 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 ZNF358Q9NW07 568 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 AP4E1Q9UPM8 1137 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 NDC80O14777 642 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 CCDC22O60826 627 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 KCNA4P22459 653 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 TKTP29401 623 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 RPL10AP62906 217 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 NCBP2-AS2Q69YL0 99 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 NOTUMQ6P988 496 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 TMEM110Q86TL2 294 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 NUDCD3Q8IVD9 361 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 SPNS2Q8IVW8 549 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 SLC25A41Q8N5S1 370 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 PDCD7Q8N8D1 485 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 ENDOVQ8N8Q3 282 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 ZNF398Q8TD17 642 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 UCMAQ8WVF2 138 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 FAXDC2Q96IV6 333 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 EBNA1BP2Q99848 306 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 SHCBP1LQ9BZQ2 653 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
GTF2F1-201ENST00000394456 BPTFQ12830 3046 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 SMIM35A0A1B0GVV1 85 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 MBLAC1A4D2B0 266 aaPredicted RBP13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 A8MXQ7 604 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 B2RBV5 119 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 CLDN5O00501 218 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 TBX10O75333 385 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 KRT37O76014 449 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 GSRP00390 522 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 TGM2P21980 687 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 ARRB2P32121 409 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 MAGEA3P43357 314 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 RASSF2P50749 326 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 CCNG1P51959 295 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 OCRLQ01968 901 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 PDK2Q15119 407 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 WASHC2DQ5SRD0 308 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 HACE1Q8IYU2 909 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 VPS52Q8N1B4 723 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 ATXN7L3BQ96GX2 97 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 NMRK1Q9NWW6 199 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 SEPT10Q9P0V9 454 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 EMCNQ9ULC0 261 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 MTO1Q9Y2Z2 717 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms