RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 RMDN2Q96LZ7 410 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 NPY6RQ99463 290 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 EBNA1BP2Q99848 306 aaKnown RBP7.43□□□□□ -1.22
SMAD1-202ENST00000394092 SYT15Q9BQS2 421 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 MTG1Q9BT17 334 aaPredicted RBP7.43□□□□□ -1.22
SMAD1-202ENST00000394092 TRIM62Q9BVG3 475 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 TRIM55Q9BYV6 548 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 MANSC1Q9H8J5 431 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 SPC25Q9HBM1 224 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 GOLGA2P5Q9HBQ8 144 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 CNGB3Q9NQW8 809 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 ARHGEF4Q9NR80 690 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 FAM105AQ9NUU6 356 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 TMEM51Q9NW97 253 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 DTLQ9NZJ0 730 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 FLRT1Q9NZU1 646 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 GJD2Q9UKL4 321 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 PCDHA11Q9Y5I1 949 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 MAD1L1Q9Y6D9 718 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 USP3Q9Y6I4 520 aa7.43□□□□□ -1.22
SMAD1-202ENST00000394092 FAM159BA6NKW6 160 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 TRIM49D1C9J1S8 452 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 I3L4J1 428 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 M0QYT0 321 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 EEF2KO00418 725 aaKnown RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 C2CD2LO14523 706 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 PTGESO14684 152 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 TNPO2O14787 897 aaKnown RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 CAPN9O14815 690 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 KLF11O14901 512 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 MTSS1O43312 755 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 HCRTO43612 131 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 METTL18O95568 372 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 THP07101 528 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 DHRS4L1P0CG22 281 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 GOT1P17174 413 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 TFE3P19532 575 aaPredicted RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 AMPD1P23109 780 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 TKTP29401 623 aaKnown RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 RPL9P32969 192 aaKnown RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 SERPINB6P35237 376 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 CCNFP41002 786 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 TKTL1P51854 596 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 NRLP54845 237 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 INHBEP58166 350 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 BEX3Q00994 111 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 FAAP100Q0VG06 881 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 SCAPQ12770 1279 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 HIC1Q14526 733 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 PAFAH1B3Q15102 231 aaKnown RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 PRKD1Q15139 912 aaPredicted RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 MDH1BQ5I0G3 518 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 INTS6LQ5JSJ4 861 aaKnown RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 ANKRD20A2Q5SQ80 823 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 SWT1Q5T5J6 900 aaKnown RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 ZNF618Q5T7W0 954 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 ANKRD20A1Q5TYW2 823 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 ANKRD20A3Q5VUR7 823 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 ATG16L1Q676U5 607 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 ZNF449Q6P9G9 518 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 DSTYKQ6XUX3 929 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 UNC5AQ6ZN44 842 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 OTOAQ7RTW8 1153 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 BNIPLQ7Z465 357 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 TBC1D1Q86TI0 1168 aaPredicted RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 FAM35AQ86V20 835 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 ECHDC2Q86YB7 292 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 RASAL3Q86YV0 1011 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 IGDCC3Q8IVU1 814 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 DEPDC1BQ8WUY9 529 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 C10orf82Q8WW14 230 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 INPP5DQ92835 1189 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 ERP27Q96DN0 273 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 SMARCD1Q96GM5 515 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 SENP8Q96LD8 212 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 LPIN3Q9BQK8 851 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 TSSK1BQ9BXA7 367 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 BRD8Q9H0E9 1235 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 ZFYVE28Q9HCC9 887 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 SLCO1B3Q9NPD5 702 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 DDX43Q9NXZ2 648 aaKnown RBP7.42□□□□□ -1.22
SMAD1-202ENST00000394092 CDH9Q9ULB4 789 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 GRID1Q9ULK0 1009 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 GIT1Q9Y2X7 761 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 CDY2AQ9Y6F7 541 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 PTPRDP23468 1912 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 SHROOM3Q8TF72 1996 aa7.42□□□□□ -1.22
SMAD1-202ENST00000394092 GOLGA8RI6L899 631 aa7.41□□□□□ -1.22
SMAD1-202ENST00000394092 IGF2BP3O00425 579 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMAD1-202ENST00000394092 GPR182O15218 404 aa7.41□□□□□ -1.22
SMAD1-202ENST00000394092 MFSD11O43934 449 aa7.41□□□□□ -1.22
SMAD1-202ENST00000394092 AVILO75366 819 aa7.41□□□□□ -1.22
SMAD1-202ENST00000394092 AP1G2O75843 785 aa7.41□□□□□ -1.22
SMAD1-202ENST00000394092 MAP3K6O95382 1288 aa7.41□□□□□ -1.22
SMAD1-202ENST00000394092 ATP6V1G2O95670 118 aa7.41□□□□□ -1.22
SMAD1-202ENST00000394092 F9P00740 461 aa7.41□□□□□ -1.22
SMAD1-202ENST00000394092 C6orf222P0C671 652 aaPredicted RBP7.41□□□□□ -1.22
SMAD1-202ENST00000394092 ODC1P11926 461 aa7.41□□□□□ -1.22
SMAD1-202ENST00000394092 PGAM1P18669 254 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms