RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SH3RF2Q8TEC5 729 aa13.77□□□□□ -0.2
USP44-202ENST00000393091 RASAL2Q9UJF2 1139 aa13.77□□□□□ -0.2
USP44-202ENST00000393091 ACSL4O60488 711 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 TBX18O95935 607 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 PSMA2P25787 234 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 L1CAMP32004 1257 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 CTNNA1P35221 906 aaKnown RBP13.77□□□□□ -0.21
USP44-202ENST00000393091 EFEMP1Q12805 493 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 TANGO2Q6ICL3 276 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 CCAR2Q8N163 923 aaKnown RBP13.77□□□□□ -0.21
USP44-202ENST00000393091 EMC1Q8N766 993 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 CYP2S1Q96SQ9 504 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 CDH22Q9UJ99 828 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 AGO1Q9UL18 857 aaKnown RBP13.77□□□□□ -0.21
USP44-202ENST00000393091 CCL26Q9Y258 94 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 GRID2IPA4D2P6 1211 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 I6L893 689 aaPredicted RBP13.77□□□□□ -0.21
USP44-202ENST00000393091 GJA1P17302 382 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 ADGRF1Q5T601 910 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 NADSYN1Q6IA69 706 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 C1orf228Q6PIY5 440 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 CHST9Q7L1S5 443 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.77□□□□□ -0.21
USP44-202ENST00000393091 ZNF557Q8N988 423 aaPredicted RBP13.77□□□□□ -0.21
USP44-202ENST00000393091 LMLNQ96KR4 655 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 SLC2A11Q9BYW1 496 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 FAM204AQ9H8W3 233 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 THG1LQ9NWX6 298 aaKnown RBP13.77□□□□□ -0.21
USP44-202ENST00000393091 DDIT4Q9NX09 232 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.77□□□□□ -0.21
USP44-202ENST00000393091 ZNF212Q9UDV6 495 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 SFMBT1Q9UHJ3 866 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 LSM7Q9UK45 103 aaKnown RBP13.77□□□□□ -0.21
USP44-202ENST00000393091 EFR3BQ9Y2G0 817 aa13.77□□□□□ -0.21
USP44-202ENST00000393091 SLC12A8A0AV02 714 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 HEPACAM2A8MVW5 462 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 IL9P15248 144 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 PSMC3P17980 439 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 KIAA1328Q86T90 577 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 DNAAF5Q86Y56 855 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 SUGP1Q8IWZ8 645 aaKnown RBP13.76□□□□□ -0.21
USP44-202ENST00000393091 HES6Q96HZ4 224 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 TRIM7Q9C029 511 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 DDX56Q9NY93 547 aaKnown RBP13.76□□□□□ -0.21
USP44-202ENST00000393091 SLC12A6Q9UHW9 1150 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 MYO7AQ13402 2215 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 CES2O00748 559 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 BUB1BO60566 1050 aaPredicted RBP13.76□□□□□ -0.21
USP44-202ENST00000393091 GJB6O95452 261 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 TUBB4AP04350 444 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 HARS2P49590 506 aaKnown RBP13.76□□□□□ -0.21
USP44-202ENST00000393091 GAB4Q2WGN9 574 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 ARL13BQ3SXY8 428 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 ERMARDQ5T6L9 678 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 PARM1Q6UWI2 310 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 ZNF783Q6ZMS7 281 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 NT5DC3Q86UY8 548 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 KATNAL2Q8IYT4 538 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 FGF14Q92915 247 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 PEBP4Q96S96 227 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 DESI2Q9BSY9 194 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 PLA2G2FQ9BZM2 168 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 WDCPQ9H6R7 721 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 ANLNQ9NQW6 1124 aa13.76□□□□□ -0.21
USP44-202ENST00000393091 C3orf70A6NLC5 250 aaPredicted RBP13.75□□□□□ -0.21
USP44-202ENST00000393091 MIF4GDA9UHW6 222 aaKnown RBP13.75□□□□□ -0.21
USP44-202ENST00000393091 RNF8O76064 485 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 APOEP02649 317 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 CKMP06732 381 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 KRT7P08729 469 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 MIPP30301 263 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 CHKAP35790 457 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 SLC11A2P49281 568 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 PDK2Q15119 407 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 C15orf59Q2T9L4 293 aaPredicted RBP13.75□□□□□ -0.21
USP44-202ENST00000393091 MS4A13Q5J8X5 152 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 RSRC2Q7L4I2 434 aaKnown RBP13.75□□□□□ -0.21
USP44-202ENST00000393091 ADGRG2Q8IZP9 1017 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 ING5Q8WYH8 240 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 WBP2Q969T9 261 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 CFAP97Q9P2B7 532 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 USP18Q9UMW8 372 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 PCDHA3Q9Y5H8 950 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 GRAP2O75791 330 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
USP44-202ENST00000393091 CORO1AP31146 461 aaKnown RBP13.75□□□□□ -0.21
USP44-202ENST00000393091 PEX5P50542 639 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 CDR1P51861 262 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 COPS2P61201 443 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 IFRD2Q12894 506 aaPredicted RBP13.75□□□□□ -0.21
USP44-202ENST00000393091 PIK3R6Q5UE93 754 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 TRIM58Q8NG06 486 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 ATP2A3Q93084 1043 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 PRDM6Q9NQX0 595 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 DUSP12Q9UNI6 340 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 SH3PXD2AQ5TCZ1 1133 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 AFMIDQ63HM1 303 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 FATE1Q969F0 183 aa13.75□□□□□ -0.21
USP44-202ENST00000393091 APOL5Q9BWW9 433 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms