RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 TCP10LQ8TDR4 215 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 LRRC8CQ8TDW0 803 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 SIGLEC10Q96LC7 697 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 SPATA13Q96N96 652 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 XPNPEP3Q9NQH7 507 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 CNGB3Q9NQW8 809 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 GSTA1P08263 222 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 USP17L7P0C7H9 530 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 ADRA1DP25100 572 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 GRIA1P42261 906 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 CACNB2Q08289 660 aaPredicted RBP26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 FAM133BQ5BKY9 247 aaKnown RBP26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 CTU1Q7Z7A3 348 aaKnown RBP26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 PPM1NQ8N819 430 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 SERAC1Q96JX3 654 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 PLCD4Q9BRC7 762 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 SLCO1B3Q9NPD5 702 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 PHTF1Q9UMS5 762 aa26.44■■□□□ 1.82
SMARCD3-203ENST00000392811 CXorf49A8MYA2 514 aaPredicted RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 HHLA1C9JL84 531 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 PRKCHP24723 683 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 TM4SF4P48230 202 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 DPYSQ14117 519 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 PRKD1Q15139 912 aaPredicted RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 KCNA10Q16322 511 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 UNC5AQ6ZN44 842 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 SLC26A11Q86WA9 606 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 CTAGE3PQ8IX95 158 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 MPP5Q8N3R9 675 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 RTP3Q9BQQ7 232 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 RHOBTB2Q9BYZ6 727 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 C12orf65Q9H3J6 166 aaKnown RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 STARD13Q9Y3M8 1113 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 C9IYK1 514 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 EEF2KO00418 725 aaKnown RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 TRDMT1O14717 391 aaKnown RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 TM9SF1O15321 606 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 ZNF623O75123 536 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 DNAJC8O75937 253 aaPredicted RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 FAM155BO75949 473 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 UBOX5O94941 541 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 POMCP01189 267 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 RPLP2P05387 115 aaKnown RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 PCSK1P29120 753 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 ADRA1BP35368 520 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 PRKCZQ05513 592 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 RFX8Q6ZV50 586 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 SMARCD1Q96GM5 515 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 SLC9A7Q96T83 725 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 EBNA1BP2Q99848 306 aaKnown RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 TRIM56Q9BRZ2 755 aaKnown RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 XAB2Q9HCS7 855 aaKnown RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 WDR6Q9NNW5 1121 aaKnown RBP26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 ANLNQ9NQW6 1124 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 SLC17A7Q9P2U7 560 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 MAD1L1Q9Y6D9 718 aa26.43■■□□□ 1.82
SMARCD3-203ENST00000392811 SF3B1O75533 1304 aaKnown RBP eCLIP26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 F5H423 210 aaPredicted RBP26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 APOEP02649 317 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 GSTA2P09210 222 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 AP1B1Q10567 949 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 PAFAH1B3Q15102 231 aaKnown RBP26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 SEPT7Q16181 437 aaKnown RBP26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 PAN2Q504Q3 1202 aaKnown RBP26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 LRRC6Q86X45 466 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 CCDC63Q8NA47 563 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 P2RY11Q96G91 374 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 RMDN2Q96LZ7 410 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 SLC40A1Q9NP59 571 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 KLHL14Q9P2G3 628 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 TLL2Q9Y6L7 1015 aa26.42■■□□□ 1.82
SMARCD3-203ENST00000392811 FAM72CH0Y354 149 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 RNF103O00237 685 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 EDF1O60869 148 aaKnown RBP26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 ODC1P11926 461 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 NCAM1P13591 858 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 FDFT1P37268 417 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 RAB27AP51159 221 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 MGAT5Q09328 741 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 DSC3Q14574 896 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 FAM72AQ5TYM5 149 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 FAM72DQ6L9T8 149 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 SH2D5Q6ZV89 423 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 FAM72BQ86X60 149 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 COLGALT1Q8NBJ5 622 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 ZNF75CPQ92670 426 aaPredicted RBP26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 MYLPFQ96A32 169 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 NTAN1Q96AB6 310 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 SMYD2Q9NRG4 433 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 I6L893 689 aaPredicted RBP26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 LTFP02788 710 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 GLUD2P49448 558 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 SLC20A2Q08357 652 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 PDK1Q15118 436 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 TTC39BQ5VTQ0 682 aaPredicted RBP26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 RNF43Q68DV7 783 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 BHLHA9Q7RTU4 235 aa26.41■■□□□ 1.82
SMARCD3-203ENST00000392811 HAUS2Q9NVX0 235 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms